Gene : Ca_08327 C. arietinum v1.0

Defline:  (1 of 1) K03141 - transcription initiation factor TFIIH subunit 1 (TFIIH1, GTF2H1, TFB1) Genomic Order:  829
Name:  ? Ca_08327 Secondary Identifier:  ? PAC:40146929

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_08327 0.5kb upstream 0.5kb upstream 12156 true Ca4: 8378817-8390972 Cicer arietinum
Ca_08327 0.5kb upstream 0.5kb upstream 500 false Ca4: 8390473-8390972 Cicer arietinum
Ca_08327 0.5kb downstream 0.5kb downstream 12156 true Ca4: 8378317-8390472 Cicer arietinum
Ca_08327 0.5kb downstream 0.5kb downstream 500 false Ca4: 8378317-8378816 Cicer arietinum
Ca_08327 1.0kb upstream 1.0kb upstream 12656 true Ca4: 8378817-8391472 Cicer arietinum
Ca_08327 1.0kb upstream 1.0kb upstream 1000 false Ca4: 8390473-8391472 Cicer arietinum
Ca_08327 1.0kb downstream 1.0kb downstream 12656 true Ca4: 8377817-8390472 Cicer arietinum
Ca_08327 1.0kb downstream 1.0kb downstream 1000 false Ca4: 8377817-8378816 Cicer arietinum
Ca_08327 2.0kb upstream 2.0kb upstream 13656 true Ca4: 8378817-8392472 Cicer arietinum
Ca_08327 2.0kb upstream 2.0kb upstream 2000 false Ca4: 8390473-8392472 Cicer arietinum
Ca_08327 2.0kb downstream 2.0kb downstream 13656 true Ca4: 8376817-8390472 Cicer arietinum
Ca_08327 2.0kb downstream 2.0kb downstream 2000 false Ca4: 8376817-8378816 Cicer arietinum
Ca_08327 5.0kb upstream 5.0kb upstream 16656 true Ca4: 8378817-8395472 Cicer arietinum
Ca_08327 5.0kb upstream 5.0kb upstream 5000 false Ca4: 8390473-8395472 Cicer arietinum
Ca_08327 5.0kb downstream 5.0kb downstream 16656 true Ca4: 8373817-8390472 Cicer arietinum
Ca_08327 5.0kb downstream 5.0kb downstream 5000 false Ca4: 8373817-8378816 Cicer arietinum
Ca_08327 10.0kb upstream 10.0kb upstream 21656 true Ca4: 8378817-8400472 Cicer arietinum
Ca_08327 10.0kb upstream 10.0kb upstream 10000 false Ca4: 8390473-8400472 Cicer arietinum
Ca_08327 10.0kb downstream 10.0kb downstream 21656 true Ca4: 8368817-8390472 Cicer arietinum
Ca_08327 10.0kb downstream 10.0kb downstream 10000 false Ca4: 8368817-8378816 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299700 5265 Fabidae View MSA
124068692 5270 Rosid View MSA
123738244 5271 Pentapetalae View MSA
122787782 5272 Eudicot View MSA
122047682 5273 Angiosperm View MSA
121347472 5274 Embryophyte View MSA
123425427 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain