Gene : Ca_16888 C. arietinum v1.0
Defline:  (1 of 1) PTHR12001//PTHR12001:SF57 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  2033
Name:  ? Ca_16888 Secondary Identifier:  ? PAC:40159054
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Carietinum PWY-5120 Cicer arietinum pathologic  
Carietinum PWY-5910 Cicer arietinum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_16888 0.5kb upstream 0.5kb upstream 1295 true Ca2: 34811942-34813236 Cicer arietinum
Ca_16888 0.5kb upstream 0.5kb upstream 500 false Ca2: 34812737-34813236 Cicer arietinum
Ca_16888 0.5kb downstream 0.5kb downstream 1295 true Ca2: 34811442-34812736 Cicer arietinum
Ca_16888 0.5kb downstream 0.5kb downstream 500 false Ca2: 34811442-34811941 Cicer arietinum
Ca_16888 1.0kb upstream 1.0kb upstream 1795 true Ca2: 34811942-34813736 Cicer arietinum
Ca_16888 1.0kb upstream 1.0kb upstream 1000 false Ca2: 34812737-34813736 Cicer arietinum
Ca_16888 1.0kb downstream 1.0kb downstream 1795 true Ca2: 34810942-34812736 Cicer arietinum
Ca_16888 1.0kb downstream 1.0kb downstream 1000 false Ca2: 34810942-34811941 Cicer arietinum
Ca_16888 2.0kb upstream 2.0kb upstream 2795 true Ca2: 34811942-34814736 Cicer arietinum
Ca_16888 2.0kb upstream 2.0kb upstream 2000 false Ca2: 34812737-34814736 Cicer arietinum
Ca_16888 2.0kb downstream 2.0kb downstream 2795 true Ca2: 34809942-34812736 Cicer arietinum
Ca_16888 2.0kb downstream 2.0kb downstream 2000 false Ca2: 34809942-34811941 Cicer arietinum
Ca_16888 5.0kb upstream 5.0kb upstream 5795 true Ca2: 34811942-34817736 Cicer arietinum
Ca_16888 5.0kb upstream 5.0kb upstream 5000 false Ca2: 34812737-34817736 Cicer arietinum
Ca_16888 5.0kb downstream 5.0kb downstream 5795 true Ca2: 34806942-34812736 Cicer arietinum
Ca_16888 5.0kb downstream 5.0kb downstream 5000 false Ca2: 34806942-34811941 Cicer arietinum
Ca_16888 10.0kb upstream 10.0kb upstream 10795 true Ca2: 34811942-34822736 Cicer arietinum
Ca_16888 10.0kb upstream 10.0kb upstream 10000 false Ca2: 34812737-34822736 Cicer arietinum
Ca_16888 10.0kb downstream 10.0kb downstream 10795 true Ca2: 34801942-34812736 Cicer arietinum
Ca_16888 10.0kb downstream 10.0kb downstream 10000 false Ca2: 34801942-34811941 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792206 5273 Angiosperm View MSA
122305785 5265 Fabidae View MSA
124070417 5270 Rosid View MSA
123742390 5271 Pentapetalae View MSA
122796955 5272 Eudicot View MSA
121063452 5274 Embryophyte View MSA
123103200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain