Gene : Zm00001d025171 Z. mays RefGen_V4
Defline:  (1 of 16) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1443
Name:  ? Zm00001d025171 Secondary Identifier:  ? PAC:40174509
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00001d025171 0.5kb upstream 0.5kb upstream 5338 true 10: 107516183-107521520 Zea mays
Zm00001d025171 0.5kb upstream 0.5kb upstream 500 false 10: 107521021-107521520 Zea mays
Zm00001d025171 0.5kb downstream 0.5kb downstream 5338 true 10: 107515683-107521020 Zea mays
Zm00001d025171 0.5kb downstream 0.5kb downstream 500 false 10: 107515683-107516182 Zea mays
Zm00001d025171 1.0kb upstream 1.0kb upstream 5838 true 10: 107516183-107522020 Zea mays
Zm00001d025171 1.0kb upstream 1.0kb upstream 1000 false 10: 107521021-107522020 Zea mays
Zm00001d025171 1.0kb downstream 1.0kb downstream 5838 true 10: 107515183-107521020 Zea mays
Zm00001d025171 1.0kb downstream 1.0kb downstream 1000 false 10: 107515183-107516182 Zea mays
Zm00001d025171 2.0kb upstream 2.0kb upstream 6838 true 10: 107516183-107523020 Zea mays
Zm00001d025171 2.0kb upstream 2.0kb upstream 2000 false 10: 107521021-107523020 Zea mays
Zm00001d025171 2.0kb downstream 2.0kb downstream 6838 true 10: 107514183-107521020 Zea mays
Zm00001d025171 2.0kb downstream 2.0kb downstream 2000 false 10: 107514183-107516182 Zea mays
Zm00001d025171 5.0kb upstream 5.0kb upstream 9838 true 10: 107516183-107526020 Zea mays
Zm00001d025171 5.0kb upstream 5.0kb upstream 5000 false 10: 107521021-107526020 Zea mays
Zm00001d025171 5.0kb downstream 5.0kb downstream 9838 true 10: 107511183-107521020 Zea mays
Zm00001d025171 5.0kb downstream 5.0kb downstream 5000 false 10: 107511183-107516182 Zea mays
Zm00001d025171 10.0kb upstream 10.0kb upstream 14838 true 10: 107516183-107531020 Zea mays
Zm00001d025171 10.0kb upstream 10.0kb upstream 10000 false 10: 107521021-107531020 Zea mays
Zm00001d025171 10.0kb downstream 10.0kb downstream 14838 true 10: 107506183-107521020 Zea mays
Zm00001d025171 10.0kb downstream 10.0kb downstream 10000 false 10: 107506183-107516182 Zea mays

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185269 5267 Panicoideae View MSA
124573617 5269 Grass View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain