Gene : Zm00001d015638 Z. mays RefGen_V4
Defline:  (1 of 16) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  2243
Name:  ? Zm00001d015638 Secondary Identifier:  ? PAC:40294214
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00001d015638 0.5kb upstream 0.5kb upstream 3249 true 5: 102525749-102528997 Zea mays
Zm00001d015638 0.5kb upstream 0.5kb upstream 500 false 5: 102528498-102528997 Zea mays
Zm00001d015638 0.5kb downstream 0.5kb downstream 3249 true 5: 102525249-102528497 Zea mays
Zm00001d015638 0.5kb downstream 0.5kb downstream 500 false 5: 102525249-102525748 Zea mays
Zm00001d015638 1.0kb upstream 1.0kb upstream 3749 true 5: 102525749-102529497 Zea mays
Zm00001d015638 1.0kb upstream 1.0kb upstream 1000 false 5: 102528498-102529497 Zea mays
Zm00001d015638 1.0kb downstream 1.0kb downstream 3749 true 5: 102524749-102528497 Zea mays
Zm00001d015638 1.0kb downstream 1.0kb downstream 1000 false 5: 102524749-102525748 Zea mays
Zm00001d015638 2.0kb upstream 2.0kb upstream 4749 true 5: 102525749-102530497 Zea mays
Zm00001d015638 2.0kb upstream 2.0kb upstream 2000 false 5: 102528498-102530497 Zea mays
Zm00001d015638 2.0kb downstream 2.0kb downstream 4749 true 5: 102523749-102528497 Zea mays
Zm00001d015638 2.0kb downstream 2.0kb downstream 2000 false 5: 102523749-102525748 Zea mays
Zm00001d015638 5.0kb upstream 5.0kb upstream 7749 true 5: 102525749-102533497 Zea mays
Zm00001d015638 5.0kb upstream 5.0kb upstream 5000 false 5: 102528498-102533497 Zea mays
Zm00001d015638 5.0kb downstream 5.0kb downstream 7749 true 5: 102520749-102528497 Zea mays
Zm00001d015638 5.0kb downstream 5.0kb downstream 5000 false 5: 102520749-102525748 Zea mays
Zm00001d015638 10.0kb upstream 10.0kb upstream 12749 true 5: 102525749-102538497 Zea mays
Zm00001d015638 10.0kb upstream 10.0kb upstream 10000 false 5: 102528498-102538497 Zea mays
Zm00001d015638 10.0kb downstream 10.0kb downstream 12749 true 5: 102515749-102528497 Zea mays
Zm00001d015638 10.0kb downstream 10.0kb downstream 10000 false 5: 102515749-102525748 Zea mays

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027025 5273 Angiosperm View MSA
122177029 5267 Panicoideae View MSA
124586891 5269 Grass View MSA
121296748 5274 Embryophyte View MSA
123334866 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain