Protein Family : GA20292-PA, putative, expressed 123334866

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  17

17 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Seita.1G056000 (1 of 12) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) S. italica v2.2 3701   scaffold_1: 5418924-5422624
Bradi3g06556 (1 of 12) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) B. distachyon v3.1 3709   Bd3: 4747697-4751405
LOC_Os02g09630 (1 of 14) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) O. sativa v7.0 2952   Chr2: 4949532-4952483
Solyc12g099780.1 (1 of 2) PTHR33882:SF3 - RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN S. lycopersicum ITAG2.4 3015   SL2.50ch12: 66784922-66787936
Zm00008a021205 (1 of 14) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Z. mays PH207 v1.1 3423   chr05: 99413359-99416781
PGSC0003DMG400004715 (1 of 1) PTHR33882//PTHR33882:SF3 - FAMILY NOT NAMED // RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN S. tuberosum v4.03 4231   ST4.03ch12: 60366265-60370495
Pavir.1KG096400 (1 of 26) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) P. virgatum v4.1 4124   Chr01K: 9411791-9415914
Pavir.1NG086000 (1 of 26) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) P. virgatum v4.1 3965   Chr01N: 8589688-8593652
Sobic.004G073000 (1 of 10) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) S. bicolor v3.1.1 6309   Chr04: 5879307-5885615
Zm00001d015638 (1 of 16) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Z. mays RefGen_V4 2749   5: 102525749-102528497
Pahal.1G067500 (1 of 12) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) P. hallii v3.1 3234   Chr01: 4597835-4601068
PhHAL.1G065700 (1 of 12) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) P. hallii HAL v2.1 3189   Chr01: 4012246-4015434
Misin07G070200 (1 of 26) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) M. sinensis v7.1 3362   Chr07: 12903997-12907358
Misin08G070800 (1 of 26) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) M. sinensis v7.1 4641   Chr08: 15244836-15249476
OsKitaake02g070000 (1 of 13) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) O. sativa Kitaake v3.1 3275   Chr2: 5039150-5042424
Sevir.1G055500 (1 of 13) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) S. viridis v2.1 4077   Chr_01: 5212997-5217073
Brast04G270000 (1 of 12) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) B. stacei v1.1 2579   Chr04: 20206861-20209439

17 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Seita.1G056000.1.p S. italica v2.2 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae
Bradi3g06556.2.p B. distachyon v3.1 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae
LOC_Os02g09630.1 O. sativa v7.0 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae
Solyc12g099780.1.1 S. lycopersicum ITAG2.4 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae
Zm00008a021205_P01 Z. mays PH207 v1.1 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae
PGSC0003DMP400008361 S. tuberosum v4.03 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae
Pavir.1KG096400.1.p P. virgatum v4.1 123334866 GA20292-PA, putative, expressed 2 5275 Viridiplantae
Pavir.1NG086000.1.p P. virgatum v4.1 123334866 GA20292-PA, putative, expressed 2 5275 Viridiplantae
Sobic.004G073000.1.p S. bicolor v3.1.1 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae
Zm00001d015638_P004 Z. mays RefGen_V4 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae
Pahal.1G067500.1.p P. hallii v3.1 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae
PhHAL.1G065700.1.p P. hallii HAL v2.1 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae
Misin08G070800.1.p M. sinensis v7.1 123334866 GA20292-PA, putative, expressed 2 5275 Viridiplantae
Misin07G070200.1.p M. sinensis v7.1 123334866 GA20292-PA, putative, expressed 2 5275 Viridiplantae
OsKitaake02g070000.1.p O. sativa Kitaake v3.1 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae
Sevir.1G055500.1.p S. viridis v2.1 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae
Brast04G270000.1.p B. stacei v1.1 123334866 GA20292-PA, putative, expressed 1 5275 Viridiplantae