Gene : Pahal.1G067500 P. hallii v3.1
Defline:  (1 of 12) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  652
Name:  ? Pahal.1G067500 Secondary Identifier:  ? PAC:40382007
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.1G067500 0.5kb upstream 0.5kb upstream 3734 true Chr01: 4597835-4601568 Panicum hallii
Pahal.1G067500 0.5kb upstream 0.5kb upstream 500 false Chr01: 4601069-4601568 Panicum hallii
Pahal.1G067500 0.5kb downstream 0.5kb downstream 3734 true Chr01: 4597335-4601068 Panicum hallii
Pahal.1G067500 0.5kb downstream 0.5kb downstream 500 false Chr01: 4597335-4597834 Panicum hallii
Pahal.1G067500 1.0kb upstream 1.0kb upstream 4234 true Chr01: 4597835-4602068 Panicum hallii
Pahal.1G067500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4601069-4602068 Panicum hallii
Pahal.1G067500 1.0kb downstream 1.0kb downstream 4234 true Chr01: 4596835-4601068 Panicum hallii
Pahal.1G067500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4596835-4597834 Panicum hallii
Pahal.1G067500 2.0kb upstream 2.0kb upstream 5234 true Chr01: 4597835-4603068 Panicum hallii
Pahal.1G067500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4601069-4603068 Panicum hallii
Pahal.1G067500 2.0kb downstream 2.0kb downstream 5234 true Chr01: 4595835-4601068 Panicum hallii
Pahal.1G067500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4595835-4597834 Panicum hallii
Pahal.1G067500 5.0kb upstream 5.0kb upstream 8234 true Chr01: 4597835-4606068 Panicum hallii
Pahal.1G067500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4601069-4606068 Panicum hallii
Pahal.1G067500 5.0kb downstream 5.0kb downstream 8234 true Chr01: 4592835-4601068 Panicum hallii
Pahal.1G067500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4592835-4597834 Panicum hallii
Pahal.1G067500 10.0kb upstream 10.0kb upstream 13234 true Chr01: 4597835-4611068 Panicum hallii
Pahal.1G067500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4601069-4611068 Panicum hallii
Pahal.1G067500 10.0kb downstream 10.0kb downstream 13234 true Chr01: 4587835-4601068 Panicum hallii
Pahal.1G067500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4587835-4597834 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027025 5273 Angiosperm View MSA
122177029 5267 Panicoideae View MSA
124586891 5269 Grass View MSA
121296748 5274 Embryophyte View MSA
123334866 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain