Gene : LOC_Os02g09630 O. sativa v7.0
Defline:  (1 of 14) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  713
Name:  ? LOC_Os02g09630 Secondary Identifier:  ? PAC:33139257
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os02g09630 0.5kb upstream 0.5kb upstream 3452 true Chr2: 4949532-4952983 Oryza sativa
LOC_Os02g09630 0.5kb upstream 0.5kb upstream 500 false Chr2: 4952484-4952983 Oryza sativa
LOC_Os02g09630 0.5kb downstream 0.5kb downstream 3452 true Chr2: 4949032-4952483 Oryza sativa
LOC_Os02g09630 0.5kb downstream 0.5kb downstream 500 false Chr2: 4949032-4949531 Oryza sativa
LOC_Os02g09630 1.0kb upstream 1.0kb upstream 3952 true Chr2: 4949532-4953483 Oryza sativa
LOC_Os02g09630 1.0kb upstream 1.0kb upstream 1000 false Chr2: 4952484-4953483 Oryza sativa
LOC_Os02g09630 1.0kb downstream 1.0kb downstream 3952 true Chr2: 4948532-4952483 Oryza sativa
LOC_Os02g09630 1.0kb downstream 1.0kb downstream 1000 false Chr2: 4948532-4949531 Oryza sativa
LOC_Os02g09630 2.0kb upstream 2.0kb upstream 4952 true Chr2: 4949532-4954483 Oryza sativa
LOC_Os02g09630 2.0kb upstream 2.0kb upstream 2000 false Chr2: 4952484-4954483 Oryza sativa
LOC_Os02g09630 2.0kb downstream 2.0kb downstream 4952 true Chr2: 4947532-4952483 Oryza sativa
LOC_Os02g09630 2.0kb downstream 2.0kb downstream 2000 false Chr2: 4947532-4949531 Oryza sativa
LOC_Os02g09630 5.0kb upstream 5.0kb upstream 7952 true Chr2: 4949532-4957483 Oryza sativa
LOC_Os02g09630 5.0kb upstream 5.0kb upstream 5000 false Chr2: 4952484-4957483 Oryza sativa
LOC_Os02g09630 5.0kb downstream 5.0kb downstream 7952 true Chr2: 4944532-4952483 Oryza sativa
LOC_Os02g09630 5.0kb downstream 5.0kb downstream 5000 false Chr2: 4944532-4949531 Oryza sativa
LOC_Os02g09630 10.0kb upstream 10.0kb upstream 12952 true Chr2: 4949532-4962483 Oryza sativa
LOC_Os02g09630 10.0kb upstream 10.0kb upstream 10000 false Chr2: 4952484-4962483 Oryza sativa
LOC_Os02g09630 10.0kb downstream 10.0kb downstream 12952 true Chr2: 4939532-4952483 Oryza sativa
LOC_Os02g09630 10.0kb downstream 10.0kb downstream 10000 false Chr2: 4939532-4949531 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027025 5273 Angiosperm View MSA
124586891 5269 Grass View MSA
121296748 5274 Embryophyte View MSA
123334866 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain