Gene : Zm00008a021205 Z. mays PH207 v1.1
Defline:  (1 of 14) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  2248
Name:  ? Zm00008a021205 Secondary Identifier:  ? PAC:37208709
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00008a021205 0.5kb upstream 0.5kb upstream 3923 true chr05: 99413359-99417281 Zea mays PH207
Zm00008a021205 0.5kb upstream 0.5kb upstream 500 false chr05: 99416782-99417281 Zea mays PH207
Zm00008a021205 0.5kb downstream 0.5kb downstream 3923 true chr05: 99412859-99416781 Zea mays PH207
Zm00008a021205 0.5kb downstream 0.5kb downstream 500 false chr05: 99412859-99413358 Zea mays PH207
Zm00008a021205 1.0kb upstream 1.0kb upstream 4423 true chr05: 99413359-99417781 Zea mays PH207
Zm00008a021205 1.0kb upstream 1.0kb upstream 1000 false chr05: 99416782-99417781 Zea mays PH207
Zm00008a021205 1.0kb downstream 1.0kb downstream 4423 true chr05: 99412359-99416781 Zea mays PH207
Zm00008a021205 1.0kb downstream 1.0kb downstream 1000 false chr05: 99412359-99413358 Zea mays PH207
Zm00008a021205 2.0kb upstream 2.0kb upstream 5423 true chr05: 99413359-99418781 Zea mays PH207
Zm00008a021205 2.0kb upstream 2.0kb upstream 2000 false chr05: 99416782-99418781 Zea mays PH207
Zm00008a021205 2.0kb downstream 2.0kb downstream 5423 true chr05: 99411359-99416781 Zea mays PH207
Zm00008a021205 2.0kb downstream 2.0kb downstream 2000 false chr05: 99411359-99413358 Zea mays PH207
Zm00008a021205 5.0kb upstream 5.0kb upstream 8423 true chr05: 99413359-99421781 Zea mays PH207
Zm00008a021205 5.0kb upstream 5.0kb upstream 5000 false chr05: 99416782-99421781 Zea mays PH207
Zm00008a021205 5.0kb downstream 5.0kb downstream 8423 true chr05: 99408359-99416781 Zea mays PH207
Zm00008a021205 5.0kb downstream 5.0kb downstream 5000 false chr05: 99408359-99413358 Zea mays PH207
Zm00008a021205 10.0kb upstream 10.0kb upstream 13423 true chr05: 99413359-99426781 Zea mays PH207
Zm00008a021205 10.0kb upstream 10.0kb upstream 10000 false chr05: 99416782-99426781 Zea mays PH207
Zm00008a021205 10.0kb downstream 10.0kb downstream 13423 true chr05: 99403359-99416781 Zea mays PH207
Zm00008a021205 10.0kb downstream 10.0kb downstream 10000 false chr05: 99403359-99413358 Zea mays PH207

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027025 5273 Angiosperm View MSA
122177029 5267 Panicoideae View MSA
124586891 5269 Grass View MSA
121296748 5274 Embryophyte View MSA
123334866 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier