Gene : Brast04G270000 B. stacei v1.1
Defline:  (1 of 12) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  2700
Name:  ? Brast04G270000 Secondary Identifier:  ? PAC:32863895
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast04G270000 0.5kb upstream 0.5kb upstream 3079 true Chr04: 20206361-20209439 Brachypodium stacei
Brast04G270000 0.5kb upstream 0.5kb upstream 500 false Chr04: 20206361-20206860 Brachypodium stacei
Brast04G270000 0.5kb downstream 0.5kb downstream 3079 true Chr04: 20206861-20209939 Brachypodium stacei
Brast04G270000 0.5kb downstream 0.5kb downstream 500 false Chr04: 20209440-20209939 Brachypodium stacei
Brast04G270000 1.0kb upstream 1.0kb upstream 3579 true Chr04: 20205861-20209439 Brachypodium stacei
Brast04G270000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20205861-20206860 Brachypodium stacei
Brast04G270000 1.0kb downstream 1.0kb downstream 3579 true Chr04: 20206861-20210439 Brachypodium stacei
Brast04G270000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20209440-20210439 Brachypodium stacei
Brast04G270000 2.0kb upstream 2.0kb upstream 4579 true Chr04: 20204861-20209439 Brachypodium stacei
Brast04G270000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20204861-20206860 Brachypodium stacei
Brast04G270000 2.0kb downstream 2.0kb downstream 4579 true Chr04: 20206861-20211439 Brachypodium stacei
Brast04G270000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20209440-20211439 Brachypodium stacei
Brast04G270000 5.0kb upstream 5.0kb upstream 7579 true Chr04: 20201861-20209439 Brachypodium stacei
Brast04G270000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20201861-20206860 Brachypodium stacei
Brast04G270000 5.0kb downstream 5.0kb downstream 7579 true Chr04: 20206861-20214439 Brachypodium stacei
Brast04G270000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20209440-20214439 Brachypodium stacei
Brast04G270000 10.0kb upstream 10.0kb upstream 12579 true Chr04: 20196861-20209439 Brachypodium stacei
Brast04G270000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20196861-20206860 Brachypodium stacei
Brast04G270000 10.0kb downstream 10.0kb downstream 12579 true Chr04: 20206861-20219439 Brachypodium stacei
Brast04G270000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20209440-20219439 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027025 5273 Angiosperm View MSA
124586891 5269 Grass View MSA
121296748 5274 Embryophyte View MSA
123334866 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain