Gene : Solyc12g099780.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR33882:SF3 - RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR008700 Defence response, Rin4
Genomic Order:  2422 Name:  ? Solyc12g099780.1
Secondary Identifier:  ? PAC:36147052
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g099780.1 0.5kb upstream 0.5kb upstream 3515 true SL2.50ch12: 66784922-66788436 Solanum lycopersicum
Solyc12g099780.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 66787937-66788436 Solanum lycopersicum
Solyc12g099780.1 0.5kb downstream 0.5kb downstream 3515 true SL2.50ch12: 66784422-66787936 Solanum lycopersicum
Solyc12g099780.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 66784422-66784921 Solanum lycopersicum
Solyc12g099780.1 1.0kb upstream 1.0kb upstream 4015 true SL2.50ch12: 66784922-66788936 Solanum lycopersicum
Solyc12g099780.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 66787937-66788936 Solanum lycopersicum
Solyc12g099780.1 1.0kb downstream 1.0kb downstream 4015 true SL2.50ch12: 66783922-66787936 Solanum lycopersicum
Solyc12g099780.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 66783922-66784921 Solanum lycopersicum
Solyc12g099780.1 2.0kb upstream 2.0kb upstream 5015 true SL2.50ch12: 66784922-66789936 Solanum lycopersicum
Solyc12g099780.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 66787937-66789936 Solanum lycopersicum
Solyc12g099780.1 2.0kb downstream 2.0kb downstream 5015 true SL2.50ch12: 66782922-66787936 Solanum lycopersicum
Solyc12g099780.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 66782922-66784921 Solanum lycopersicum
Solyc12g099780.1 5.0kb upstream 5.0kb upstream 8015 true SL2.50ch12: 66784922-66792936 Solanum lycopersicum
Solyc12g099780.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 66787937-66792936 Solanum lycopersicum
Solyc12g099780.1 5.0kb downstream 5.0kb downstream 8015 true SL2.50ch12: 66779922-66787936 Solanum lycopersicum
Solyc12g099780.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 66779922-66784921 Solanum lycopersicum
Solyc12g099780.1 10.0kb upstream 10.0kb upstream 13015 true SL2.50ch12: 66784922-66797936 Solanum lycopersicum
Solyc12g099780.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 66787937-66797936 Solanum lycopersicum
Solyc12g099780.1 10.0kb downstream 10.0kb downstream 13015 true SL2.50ch12: 66774922-66787936 Solanum lycopersicum
Solyc12g099780.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 66774922-66784921 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027025 5273 Angiosperm View MSA
121385977 5263 Asterids View MSA
123667650 5271 Pentapetalae View MSA
122701557 5272 Eudicot View MSA
121296748 5274 Embryophyte View MSA
123334866 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain