Gene : Zm00001d053941 Z. mays RefGen_V4
Defline:  (1 of 5) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  3984
Name:  ? Zm00001d053941 Secondary Identifier:  ? PAC:40271771
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Zmays BRANCHED-CHAIN-AA-SYN-PWY Zea mays pathologic  
Zmays LEUSYN-PWY Zea mays pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Zm00001d053941 0.5kb upstream 0.5kb upstream 3113 true 4: 243904766-243907878 Zea mays
Zm00001d053941 0.5kb upstream 0.5kb upstream 500 false 4: 243907379-243907878 Zea mays
Zm00001d053941 0.5kb downstream 0.5kb downstream 3113 true 4: 243904266-243907378 Zea mays
Zm00001d053941 0.5kb downstream 0.5kb downstream 500 false 4: 243904266-243904765 Zea mays
Zm00001d053941 1.0kb upstream 1.0kb upstream 3613 true 4: 243904766-243908378 Zea mays
Zm00001d053941 1.0kb upstream 1.0kb upstream 1000 false 4: 243907379-243908378 Zea mays
Zm00001d053941 1.0kb downstream 1.0kb downstream 3613 true 4: 243903766-243907378 Zea mays
Zm00001d053941 1.0kb downstream 1.0kb downstream 1000 false 4: 243903766-243904765 Zea mays
Zm00001d053941 2.0kb upstream 2.0kb upstream 4613 true 4: 243904766-243909378 Zea mays
Zm00001d053941 2.0kb upstream 2.0kb upstream 2000 false 4: 243907379-243909378 Zea mays
Zm00001d053941 2.0kb downstream 2.0kb downstream 4613 true 4: 243902766-243907378 Zea mays
Zm00001d053941 2.0kb downstream 2.0kb downstream 2000 false 4: 243902766-243904765 Zea mays
Zm00001d053941 5.0kb upstream 5.0kb upstream 7613 true 4: 243904766-243912378 Zea mays
Zm00001d053941 5.0kb upstream 5.0kb upstream 5000 false 4: 243907379-243912378 Zea mays
Zm00001d053941 5.0kb downstream 5.0kb downstream 7613 true 4: 243899766-243907378 Zea mays
Zm00001d053941 5.0kb downstream 5.0kb downstream 5000 false 4: 243899766-243904765 Zea mays
Zm00001d053941 10.0kb upstream 10.0kb upstream 12613 true 4: 243904766-243917378 Zea mays
Zm00001d053941 10.0kb upstream 10.0kb upstream 10000 false 4: 243907379-243917378 Zea mays
Zm00001d053941 10.0kb downstream 10.0kb downstream 12613 true 4: 243894766-243907378 Zea mays
Zm00001d053941 10.0kb downstream 10.0kb downstream 10000 false 4: 243894766-243904765 Zea mays

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030041 5273 Angiosperm View MSA
122200697 5267 Panicoideae View MSA
124468506 5269 Grass View MSA
121348898 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain