Gene : HanXRQChr00c0838g0577641 H. annuus r1.2
Defline:  (1 of 58) 1.10.3.9 - Photosystem II Genomic Order:  1
Name:  ? HanXRQChr00c0838g0577641 Secondary Identifier:  ? PAC:40335356
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PHOTOALL-PWY Helianthus annuus pathologic  
Hannuus PWY-101 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr00c0838g0577641 0.5kb upstream 0.5kb upstream 1004 true HanXRQChr00c0838: 8827-9830 Helianthus annuus
HanXRQChr00c0838g0577641 0.5kb upstream 0.5kb upstream 500 false HanXRQChr00c0838: 8827-9326 Helianthus annuus
HanXRQChr00c0838g0577641 0.5kb downstream 0.5kb downstream 1004 true HanXRQChr00c0838: 9327-10330 Helianthus annuus
HanXRQChr00c0838g0577641 0.5kb downstream 0.5kb downstream 500 false HanXRQChr00c0838: 9831-10330 Helianthus annuus
HanXRQChr00c0838g0577641 1.0kb upstream 1.0kb upstream 1504 true HanXRQChr00c0838: 8327-9830 Helianthus annuus
HanXRQChr00c0838g0577641 1.0kb upstream 1.0kb upstream 1000 false HanXRQChr00c0838: 8327-9326 Helianthus annuus
HanXRQChr00c0838g0577641 1.0kb downstream 1.0kb downstream 1504 true HanXRQChr00c0838: 9327-10830 Helianthus annuus
HanXRQChr00c0838g0577641 1.0kb downstream 1.0kb downstream 1000 false HanXRQChr00c0838: 9831-10830 Helianthus annuus
HanXRQChr00c0838g0577641 2.0kb upstream 2.0kb upstream 2504 true HanXRQChr00c0838: 7327-9830 Helianthus annuus
HanXRQChr00c0838g0577641 2.0kb upstream 2.0kb upstream 2000 false HanXRQChr00c0838: 7327-9326 Helianthus annuus
HanXRQChr00c0838g0577641 2.0kb downstream 2.0kb downstream 2504 true HanXRQChr00c0838: 9327-11830 Helianthus annuus
HanXRQChr00c0838g0577641 2.0kb downstream 2.0kb downstream 2000 false HanXRQChr00c0838: 9831-11830 Helianthus annuus
HanXRQChr00c0838g0577641 5.0kb upstream 5.0kb upstream 5504 true HanXRQChr00c0838: 4327-9830 Helianthus annuus
HanXRQChr00c0838g0577641 5.0kb upstream 5.0kb upstream 5000 false HanXRQChr00c0838: 4327-9326 Helianthus annuus
HanXRQChr00c0838g0577641 5.0kb downstream 5.0kb downstream 3899 true HanXRQChr00c0838: 9327-13225 Helianthus annuus
HanXRQChr00c0838g0577641 5.0kb downstream 5.0kb downstream 3395 false HanXRQChr00c0838: 9831-13225 Helianthus annuus
HanXRQChr00c0838g0577641 10.0kb upstream 10.0kb upstream 9830 true HanXRQChr00c0838: 1-9830 Helianthus annuus
HanXRQChr00c0838g0577641 10.0kb upstream 10.0kb upstream 9326 false HanXRQChr00c0838: 1-9326 Helianthus annuus
HanXRQChr00c0838g0577641 10.0kb downstream 10.0kb downstream 3899 true HanXRQChr00c0838: 9327-13225 Helianthus annuus
HanXRQChr00c0838g0577641 10.0kb downstream 10.0kb downstream 3395 false HanXRQChr00c0838: 9831-13225 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121453000 5263 Asterids View MSA
123753442 5271 Pentapetalae View MSA
122794783 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain