Gene : HanXRQChr01g0023401 H. annuus r1.2
Defline:  (1 of 2) PTHR12358//PTHR12358:SF39 - SPHINGOSINE KINASE // SUBFAMILY NOT NAMED Genomic Order:  2120
Name:  ? HanXRQChr01g0023401 Secondary Identifier:  ? PAC:40324077
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PWY-5129 Helianthus annuus pathologic  
Hannuus PWY-6483 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr01g0023401 0.5kb upstream 0.5kb upstream 9813 true HanXRQChr01: 130303471-130313283 Helianthus annuus
HanXRQChr01g0023401 0.5kb upstream 0.5kb upstream 500 false HanXRQChr01: 130312784-130313283 Helianthus annuus
HanXRQChr01g0023401 0.5kb downstream 0.5kb downstream 9813 true HanXRQChr01: 130302971-130312783 Helianthus annuus
HanXRQChr01g0023401 0.5kb downstream 0.5kb downstream 500 false HanXRQChr01: 130302971-130303470 Helianthus annuus
HanXRQChr01g0023401 1.0kb upstream 1.0kb upstream 10313 true HanXRQChr01: 130303471-130313783 Helianthus annuus
HanXRQChr01g0023401 1.0kb upstream 1.0kb upstream 1000 false HanXRQChr01: 130312784-130313783 Helianthus annuus
HanXRQChr01g0023401 1.0kb downstream 1.0kb downstream 10313 true HanXRQChr01: 130302471-130312783 Helianthus annuus
HanXRQChr01g0023401 1.0kb downstream 1.0kb downstream 1000 false HanXRQChr01: 130302471-130303470 Helianthus annuus
HanXRQChr01g0023401 2.0kb upstream 2.0kb upstream 11313 true HanXRQChr01: 130303471-130314783 Helianthus annuus
HanXRQChr01g0023401 2.0kb upstream 2.0kb upstream 2000 false HanXRQChr01: 130312784-130314783 Helianthus annuus
HanXRQChr01g0023401 2.0kb downstream 2.0kb downstream 11313 true HanXRQChr01: 130301471-130312783 Helianthus annuus
HanXRQChr01g0023401 2.0kb downstream 2.0kb downstream 2000 false HanXRQChr01: 130301471-130303470 Helianthus annuus
HanXRQChr01g0023401 5.0kb upstream 5.0kb upstream 14313 true HanXRQChr01: 130303471-130317783 Helianthus annuus
HanXRQChr01g0023401 5.0kb upstream 5.0kb upstream 5000 false HanXRQChr01: 130312784-130317783 Helianthus annuus
HanXRQChr01g0023401 5.0kb downstream 5.0kb downstream 14313 true HanXRQChr01: 130298471-130312783 Helianthus annuus
HanXRQChr01g0023401 5.0kb downstream 5.0kb downstream 5000 false HanXRQChr01: 130298471-130303470 Helianthus annuus
HanXRQChr01g0023401 10.0kb upstream 10.0kb upstream 19313 true HanXRQChr01: 130303471-130322783 Helianthus annuus
HanXRQChr01g0023401 10.0kb upstream 10.0kb upstream 10000 false HanXRQChr01: 130312784-130322783 Helianthus annuus
HanXRQChr01g0023401 10.0kb downstream 10.0kb downstream 19313 true HanXRQChr01: 130293471-130312783 Helianthus annuus
HanXRQChr01g0023401 10.0kb downstream 10.0kb downstream 10000 false HanXRQChr01: 130293471-130303470 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475111 5263 Asterids View MSA
123752126 5271 Pentapetalae View MSA
122793643 5272 Eudicot View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain