Gene : HanXRQChr02g0041631 H. annuus r1.2
Defline:  (1 of 3) PTHR33149:SF1 - PHOTOSYSTEM II D2 PROTEIN Genomic Order:  944
Name:  ? HanXRQChr02g0041631 Secondary Identifier:  ? PAC:40341090
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PHOTOALL-PWY Helianthus annuus pathologic  
Hannuus PWY-101 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr02g0041631 0.5kb upstream 0.5kb upstream 1082   true HanXRQChr02: 69774909-69775990 Helianthus annuus
HanXRQChr02g0041631 0.5kb upstream 0.5kb upstream 500   false HanXRQChr02: 69774909-69775408 Helianthus annuus
HanXRQChr02g0041631 0.5kb downstream 0.5kb downstream 1082   true HanXRQChr02: 69775409-69776490 Helianthus annuus
HanXRQChr02g0041631 0.5kb downstream 0.5kb downstream 500   false HanXRQChr02: 69775991-69776490 Helianthus annuus
HanXRQChr02g0041631 1.0kb upstream 1.0kb upstream 1582   true HanXRQChr02: 69774409-69775990 Helianthus annuus
HanXRQChr02g0041631 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr02: 69774409-69775408 Helianthus annuus
HanXRQChr02g0041631 1.0kb downstream 1.0kb downstream 1582   true HanXRQChr02: 69775409-69776990 Helianthus annuus
HanXRQChr02g0041631 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr02: 69775991-69776990 Helianthus annuus
HanXRQChr02g0041631 2.0kb upstream 2.0kb upstream 2582   true HanXRQChr02: 69773409-69775990 Helianthus annuus
HanXRQChr02g0041631 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr02: 69773409-69775408 Helianthus annuus
HanXRQChr02g0041631 2.0kb downstream 2.0kb downstream 2582   true HanXRQChr02: 69775409-69777990 Helianthus annuus
HanXRQChr02g0041631 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr02: 69775991-69777990 Helianthus annuus
HanXRQChr02g0041631 5.0kb upstream 5.0kb upstream 5582   true HanXRQChr02: 69770409-69775990 Helianthus annuus
HanXRQChr02g0041631 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr02: 69770409-69775408 Helianthus annuus
HanXRQChr02g0041631 5.0kb downstream 5.0kb downstream 5582   true HanXRQChr02: 69775409-69780990 Helianthus annuus
HanXRQChr02g0041631 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr02: 69775991-69780990 Helianthus annuus
HanXRQChr02g0041631 10.0kb upstream 10.0kb upstream 10582   true HanXRQChr02: 69765409-69775990 Helianthus annuus
HanXRQChr02g0041631 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr02: 69765409-69775408 Helianthus annuus
HanXRQChr02g0041631 10.0kb downstream 10.0kb downstream 10582   true HanXRQChr02: 69775409-69785990 Helianthus annuus
HanXRQChr02g0041631 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr02: 69775991-69785990 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481009 5263 Asterids View MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain