Gene : HanXRQChr16g0507191 H. annuus r1.2
Defline:  (1 of 2) K01956 - carbamoyl-phosphate synthase small subunit (carA, CPA1) Genomic Order:  859
Name:  ? HanXRQChr16g0507191 Secondary Identifier:  ? PAC:40301450
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus ARGSYNBSUB-PWY Helianthus annuus pathologic  
Hannuus ARGSYN-PWY Helianthus annuus pathologic  
Hannuus CITRULBIO-PWY Helianthus annuus pathologic  
Hannuus GLUTAMINDEG-PWY Helianthus annuus pathologic  
Hannuus PWY0-162 Helianthus annuus pathologic  
Hannuus PWY-4984 Helianthus annuus pathologic  
Hannuus PWY-5686 Helianthus annuus pathologic  
Hannuus PWY-7211 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr16g0507191 0.5kb upstream 0.5kb upstream 5737   true HanXRQChr16: 46417689-46423425 Helianthus annuus
HanXRQChr16g0507191 0.5kb upstream 0.5kb upstream 500   false HanXRQChr16: 46422926-46423425 Helianthus annuus
HanXRQChr16g0507191 0.5kb downstream 0.5kb downstream 5737   true HanXRQChr16: 46417189-46422925 Helianthus annuus
HanXRQChr16g0507191 0.5kb downstream 0.5kb downstream 500   false HanXRQChr16: 46417189-46417688 Helianthus annuus
HanXRQChr16g0507191 1.0kb upstream 1.0kb upstream 6237   true HanXRQChr16: 46417689-46423925 Helianthus annuus
HanXRQChr16g0507191 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr16: 46422926-46423925 Helianthus annuus
HanXRQChr16g0507191 1.0kb downstream 1.0kb downstream 6237   true HanXRQChr16: 46416689-46422925 Helianthus annuus
HanXRQChr16g0507191 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr16: 46416689-46417688 Helianthus annuus
HanXRQChr16g0507191 2.0kb upstream 2.0kb upstream 7237   true HanXRQChr16: 46417689-46424925 Helianthus annuus
HanXRQChr16g0507191 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr16: 46422926-46424925 Helianthus annuus
HanXRQChr16g0507191 2.0kb downstream 2.0kb downstream 7237   true HanXRQChr16: 46415689-46422925 Helianthus annuus
HanXRQChr16g0507191 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr16: 46415689-46417688 Helianthus annuus
HanXRQChr16g0507191 5.0kb upstream 5.0kb upstream 10237   true HanXRQChr16: 46417689-46427925 Helianthus annuus
HanXRQChr16g0507191 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr16: 46422926-46427925 Helianthus annuus
HanXRQChr16g0507191 5.0kb downstream 5.0kb downstream 10237   true HanXRQChr16: 46412689-46422925 Helianthus annuus
HanXRQChr16g0507191 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr16: 46412689-46417688 Helianthus annuus
HanXRQChr16g0507191 10.0kb upstream 10.0kb upstream 15237   true HanXRQChr16: 46417689-46432925 Helianthus annuus
HanXRQChr16g0507191 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr16: 46422926-46432925 Helianthus annuus
HanXRQChr16g0507191 10.0kb downstream 10.0kb downstream 15237   true HanXRQChr16: 46407689-46422925 Helianthus annuus
HanXRQChr16g0507191 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr16: 46407689-46417688 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480571 5263 Asterids View MSA
123739104 5271 Pentapetalae View MSA
122788005 5272 Eudicot View MSA
122046797 5273 Angiosperm View MSA
121347244 5274 Embryophyte View MSA
123423822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain