Gene : HanXRQChr06g0171391 H. annuus r1.2
Defline:  (1 of 2) K00053 - ketol-acid reductoisomerase (ilvC) Genomic Order:  701
Name:  ? HanXRQChr06g0171391 Secondary Identifier:  ? PAC:40330475
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus BRANCHED-CHAIN-AA-SYN-PWY Helianthus annuus pathologic  
Hannuus ILEUSYN-PWY Helianthus annuus pathologic  
Hannuus PWY-3001 Helianthus annuus pathologic  
Hannuus VALSYN-PWY Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr06g0171391 0.5kb upstream 0.5kb upstream 3418   true HanXRQChr06: 20335512-20338929 Helianthus annuus
HanXRQChr06g0171391 0.5kb upstream 0.5kb upstream 500   false HanXRQChr06: 20338430-20338929 Helianthus annuus
HanXRQChr06g0171391 0.5kb downstream 0.5kb downstream 3418   true HanXRQChr06: 20335012-20338429 Helianthus annuus
HanXRQChr06g0171391 0.5kb downstream 0.5kb downstream 500   false HanXRQChr06: 20335012-20335511 Helianthus annuus
HanXRQChr06g0171391 1.0kb upstream 1.0kb upstream 3918   true HanXRQChr06: 20335512-20339429 Helianthus annuus
HanXRQChr06g0171391 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr06: 20338430-20339429 Helianthus annuus
HanXRQChr06g0171391 1.0kb downstream 1.0kb downstream 3918   true HanXRQChr06: 20334512-20338429 Helianthus annuus
HanXRQChr06g0171391 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr06: 20334512-20335511 Helianthus annuus
HanXRQChr06g0171391 2.0kb upstream 2.0kb upstream 4918   true HanXRQChr06: 20335512-20340429 Helianthus annuus
HanXRQChr06g0171391 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr06: 20338430-20340429 Helianthus annuus
HanXRQChr06g0171391 2.0kb downstream 2.0kb downstream 4918   true HanXRQChr06: 20333512-20338429 Helianthus annuus
HanXRQChr06g0171391 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr06: 20333512-20335511 Helianthus annuus
HanXRQChr06g0171391 5.0kb upstream 5.0kb upstream 7918   true HanXRQChr06: 20335512-20343429 Helianthus annuus
HanXRQChr06g0171391 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr06: 20338430-20343429 Helianthus annuus
HanXRQChr06g0171391 5.0kb downstream 5.0kb downstream 7918   true HanXRQChr06: 20330512-20338429 Helianthus annuus
HanXRQChr06g0171391 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr06: 20330512-20335511 Helianthus annuus
HanXRQChr06g0171391 10.0kb upstream 10.0kb upstream 12918   true HanXRQChr06: 20335512-20348429 Helianthus annuus
HanXRQChr06g0171391 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr06: 20338430-20348429 Helianthus annuus
HanXRQChr06g0171391 10.0kb downstream 10.0kb downstream 12918   true HanXRQChr06: 20325512-20338429 Helianthus annuus
HanXRQChr06g0171391 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr06: 20325512-20335511 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468881 5263 Asterids View MSA
123749649 5271 Pentapetalae View MSA
122794973 5272 Eudicot View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain