Gene : HanXRQCPg0579861 H. annuus r1.2
Defline:  (1 of 3) K02705 - photosystem II CP43 chlorophyll apoprotein (psbC) Genomic Order:  9
Name:  ? HanXRQCPg0579861 Secondary Identifier:  ? PAC:40330111
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PHOTOALL-PWY Helianthus annuus pathologic  
Hannuus PWY-101 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQCPg0579861 0.5kb upstream 0.5kb upstream 2931   true HanXRQCP: 31992-34922 Helianthus annuus
HanXRQCPg0579861 0.5kb upstream 0.5kb upstream 500   false HanXRQCP: 31992-32491 Helianthus annuus
HanXRQCPg0579861 0.5kb downstream 0.5kb downstream 2931   true HanXRQCP: 32492-35422 Helianthus annuus
HanXRQCPg0579861 0.5kb downstream 0.5kb downstream 500   false HanXRQCP: 34923-35422 Helianthus annuus
HanXRQCPg0579861 1.0kb upstream 1.0kb upstream 3431   true HanXRQCP: 31492-34922 Helianthus annuus
HanXRQCPg0579861 1.0kb upstream 1.0kb upstream 1000   false HanXRQCP: 31492-32491 Helianthus annuus
HanXRQCPg0579861 1.0kb downstream 1.0kb downstream 3431   true HanXRQCP: 32492-35922 Helianthus annuus
HanXRQCPg0579861 1.0kb downstream 1.0kb downstream 1000   false HanXRQCP: 34923-35922 Helianthus annuus
HanXRQCPg0579861 2.0kb upstream 2.0kb upstream 4431   true HanXRQCP: 30492-34922 Helianthus annuus
HanXRQCPg0579861 2.0kb upstream 2.0kb upstream 2000   false HanXRQCP: 30492-32491 Helianthus annuus
HanXRQCPg0579861 2.0kb downstream 2.0kb downstream 4431   true HanXRQCP: 32492-36922 Helianthus annuus
HanXRQCPg0579861 2.0kb downstream 2.0kb downstream 2000   false HanXRQCP: 34923-36922 Helianthus annuus
HanXRQCPg0579861 5.0kb upstream 5.0kb upstream 7431   true HanXRQCP: 27492-34922 Helianthus annuus
HanXRQCPg0579861 5.0kb upstream 5.0kb upstream 5000   false HanXRQCP: 27492-32491 Helianthus annuus
HanXRQCPg0579861 5.0kb downstream 5.0kb downstream 7431   true HanXRQCP: 32492-39922 Helianthus annuus
HanXRQCPg0579861 5.0kb downstream 5.0kb downstream 5000   false HanXRQCP: 34923-39922 Helianthus annuus
HanXRQCPg0579861 10.0kb upstream 10.0kb upstream 12431   true HanXRQCP: 22492-34922 Helianthus annuus
HanXRQCPg0579861 10.0kb upstream 10.0kb upstream 10000   false HanXRQCP: 22492-32491 Helianthus annuus
HanXRQCPg0579861 10.0kb downstream 10.0kb downstream 12431   true HanXRQCP: 32492-44922 Helianthus annuus
HanXRQCPg0579861 10.0kb downstream 10.0kb downstream 10000   false HanXRQCP: 34923-44922 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121431987 5263 Asterids Singleton cluster - no MSA
123751197 5271 Pentapetalae View MSA
122773946 5272 Eudicot View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain