Gene : HanXRQCPg0580011 H. annuus r1.2
Defline:  (1 of 5) K01601 - ribulose-bisphosphate carboxylase large chain (rbcL) Genomic Order:  17
Name:  ? HanXRQCPg0580011 Secondary Identifier:  ? PAC:40330156
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus CALVIN-PWY Helianthus annuus pathologic  
Hannuus PHOTOALL-PWY Helianthus annuus pathologic  
Hannuus PWY-5723 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQCPg0580011 0.5kb upstream 0.5kb upstream 1979   true HanXRQCP: 54030-56008 Helianthus annuus
HanXRQCPg0580011 0.5kb upstream 0.5kb upstream 500   false HanXRQCP: 54030-54529 Helianthus annuus
HanXRQCPg0580011 0.5kb downstream 0.5kb downstream 1979   true HanXRQCP: 54530-56508 Helianthus annuus
HanXRQCPg0580011 0.5kb downstream 0.5kb downstream 500   false HanXRQCP: 56009-56508 Helianthus annuus
HanXRQCPg0580011 1.0kb upstream 1.0kb upstream 2479   true HanXRQCP: 53530-56008 Helianthus annuus
HanXRQCPg0580011 1.0kb upstream 1.0kb upstream 1000   false HanXRQCP: 53530-54529 Helianthus annuus
HanXRQCPg0580011 1.0kb downstream 1.0kb downstream 2479   true HanXRQCP: 54530-57008 Helianthus annuus
HanXRQCPg0580011 1.0kb downstream 1.0kb downstream 1000   false HanXRQCP: 56009-57008 Helianthus annuus
HanXRQCPg0580011 2.0kb upstream 2.0kb upstream 3479   true HanXRQCP: 52530-56008 Helianthus annuus
HanXRQCPg0580011 2.0kb upstream 2.0kb upstream 2000   false HanXRQCP: 52530-54529 Helianthus annuus
HanXRQCPg0580011 2.0kb downstream 2.0kb downstream 3479   true HanXRQCP: 54530-58008 Helianthus annuus
HanXRQCPg0580011 2.0kb downstream 2.0kb downstream 2000   false HanXRQCP: 56009-58008 Helianthus annuus
HanXRQCPg0580011 5.0kb upstream 5.0kb upstream 6479   true HanXRQCP: 49530-56008 Helianthus annuus
HanXRQCPg0580011 5.0kb upstream 5.0kb upstream 5000   false HanXRQCP: 49530-54529 Helianthus annuus
HanXRQCPg0580011 5.0kb downstream 5.0kb downstream 6479   true HanXRQCP: 54530-61008 Helianthus annuus
HanXRQCPg0580011 5.0kb downstream 5.0kb downstream 5000   false HanXRQCP: 56009-61008 Helianthus annuus
HanXRQCPg0580011 10.0kb upstream 10.0kb upstream 11479   true HanXRQCP: 44530-56008 Helianthus annuus
HanXRQCPg0580011 10.0kb upstream 10.0kb upstream 10000   false HanXRQCP: 44530-54529 Helianthus annuus
HanXRQCPg0580011 10.0kb downstream 10.0kb downstream 11479   true HanXRQCP: 54530-66008 Helianthus annuus
HanXRQCPg0580011 10.0kb downstream 10.0kb downstream 10000   false HanXRQCP: 56009-66008 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121432011 5263 Asterids Singleton cluster - no MSA
123753610 5271 Pentapetalae View MSA
122775167 5272 Eudicot View MSA
122051023 5273 Angiosperm View MSA
121312251 5274 Embryophyte View MSA
123428195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain