Gene : HanXRQChr13g0389991 H. annuus r1.2
Defline:  (1 of 11) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  323
Name:  ? HanXRQChr13g0389991 Secondary Identifier:  ? PAC:40315432
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr13g0389991 0.5kb upstream 0.5kb upstream 680   true HanXRQChr13: 19990387-19991066 Helianthus annuus
HanXRQChr13g0389991 0.5kb upstream 0.5kb upstream 500   false HanXRQChr13: 19990387-19990886 Helianthus annuus
HanXRQChr13g0389991 0.5kb downstream 0.5kb downstream 680   true HanXRQChr13: 19990887-19991566 Helianthus annuus
HanXRQChr13g0389991 0.5kb downstream 0.5kb downstream 500   false HanXRQChr13: 19991067-19991566 Helianthus annuus
HanXRQChr13g0389991 1.0kb upstream 1.0kb upstream 1180   true HanXRQChr13: 19989887-19991066 Helianthus annuus
HanXRQChr13g0389991 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr13: 19989887-19990886 Helianthus annuus
HanXRQChr13g0389991 1.0kb downstream 1.0kb downstream 1180   true HanXRQChr13: 19990887-19992066 Helianthus annuus
HanXRQChr13g0389991 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr13: 19991067-19992066 Helianthus annuus
HanXRQChr13g0389991 2.0kb upstream 2.0kb upstream 2180   true HanXRQChr13: 19988887-19991066 Helianthus annuus
HanXRQChr13g0389991 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr13: 19988887-19990886 Helianthus annuus
HanXRQChr13g0389991 2.0kb downstream 2.0kb downstream 2180   true HanXRQChr13: 19990887-19993066 Helianthus annuus
HanXRQChr13g0389991 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr13: 19991067-19993066 Helianthus annuus
HanXRQChr13g0389991 5.0kb upstream 5.0kb upstream 5180   true HanXRQChr13: 19985887-19991066 Helianthus annuus
HanXRQChr13g0389991 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr13: 19985887-19990886 Helianthus annuus
HanXRQChr13g0389991 5.0kb downstream 5.0kb downstream 5180   true HanXRQChr13: 19990887-19996066 Helianthus annuus
HanXRQChr13g0389991 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr13: 19991067-19996066 Helianthus annuus
HanXRQChr13g0389991 10.0kb upstream 10.0kb upstream 10180   true HanXRQChr13: 19980887-19991066 Helianthus annuus
HanXRQChr13g0389991 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr13: 19980887-19990886 Helianthus annuus
HanXRQChr13g0389991 10.0kb downstream 10.0kb downstream 10180   true HanXRQChr13: 19990887-20001066 Helianthus annuus
HanXRQChr13g0389991 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr13: 19991067-20001066 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479350 5263 Asterids View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain