Gene : HanXRQChr08g0222231 H. annuus r1.2
Defline:  (1 of 6) PTHR11709:SF103 - LACCASE-16 Genomic Order:  1355
Name:  ? HanXRQChr08g0222231 Secondary Identifier:  ? PAC:40346370
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PWY-5466 Helianthus annuus pathologic  
Hannuus PWY-6824 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr08g0222231 0.5kb upstream 0.5kb upstream 3983   true HanXRQChr08: 53898518-53902500 Helianthus annuus
HanXRQChr08g0222231 0.5kb upstream 0.5kb upstream 500   false HanXRQChr08: 53898518-53899017 Helianthus annuus
HanXRQChr08g0222231 0.5kb downstream 0.5kb downstream 3983   true HanXRQChr08: 53899018-53903000 Helianthus annuus
HanXRQChr08g0222231 0.5kb downstream 0.5kb downstream 500   false HanXRQChr08: 53902501-53903000 Helianthus annuus
HanXRQChr08g0222231 1.0kb upstream 1.0kb upstream 4483   true HanXRQChr08: 53898018-53902500 Helianthus annuus
HanXRQChr08g0222231 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr08: 53898018-53899017 Helianthus annuus
HanXRQChr08g0222231 1.0kb downstream 1.0kb downstream 4483   true HanXRQChr08: 53899018-53903500 Helianthus annuus
HanXRQChr08g0222231 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr08: 53902501-53903500 Helianthus annuus
HanXRQChr08g0222231 2.0kb upstream 2.0kb upstream 5483   true HanXRQChr08: 53897018-53902500 Helianthus annuus
HanXRQChr08g0222231 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr08: 53897018-53899017 Helianthus annuus
HanXRQChr08g0222231 2.0kb downstream 2.0kb downstream 5483   true HanXRQChr08: 53899018-53904500 Helianthus annuus
HanXRQChr08g0222231 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr08: 53902501-53904500 Helianthus annuus
HanXRQChr08g0222231 5.0kb upstream 5.0kb upstream 8483   true HanXRQChr08: 53894018-53902500 Helianthus annuus
HanXRQChr08g0222231 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr08: 53894018-53899017 Helianthus annuus
HanXRQChr08g0222231 5.0kb downstream 5.0kb downstream 8483   true HanXRQChr08: 53899018-53907500 Helianthus annuus
HanXRQChr08g0222231 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr08: 53902501-53907500 Helianthus annuus
HanXRQChr08g0222231 10.0kb upstream 10.0kb upstream 13483   true HanXRQChr08: 53889018-53902500 Helianthus annuus
HanXRQChr08g0222231 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr08: 53889018-53899017 Helianthus annuus
HanXRQChr08g0222231 10.0kb downstream 10.0kb downstream 13483   true HanXRQChr08: 53899018-53912500 Helianthus annuus
HanXRQChr08g0222231 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr08: 53902501-53912500 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779717 5273 Angiosperm View MSA
121473608 5263 Asterids View MSA
123743966 5271 Pentapetalae View MSA
122770838 5272 Eudicot View MSA
121051361 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain