Gene : HanXRQChr11g0324441 H. annuus r1.2
Defline:  (1 of 1) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  413
Name:  ? HanXRQChr11g0324441 Secondary Identifier:  ? PAC:40343141
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus GLYSYN-PWY Helianthus annuus pathologic  
Hannuus PWY-2161 Helianthus annuus pathologic  
Hannuus PWY-3841 Helianthus annuus pathologic  
Hannuus SER-GLYSYN-PWY Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr11g0324441 0.5kb upstream 0.5kb upstream 8266   true HanXRQChr11: 17593274-17601539 Helianthus annuus
HanXRQChr11g0324441 0.5kb upstream 0.5kb upstream 500   false HanXRQChr11: 17601040-17601539 Helianthus annuus
HanXRQChr11g0324441 0.5kb downstream 0.5kb downstream 8266   true HanXRQChr11: 17592774-17601039 Helianthus annuus
HanXRQChr11g0324441 0.5kb downstream 0.5kb downstream 500   false HanXRQChr11: 17592774-17593273 Helianthus annuus
HanXRQChr11g0324441 1.0kb upstream 1.0kb upstream 8766   true HanXRQChr11: 17593274-17602039 Helianthus annuus
HanXRQChr11g0324441 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr11: 17601040-17602039 Helianthus annuus
HanXRQChr11g0324441 1.0kb downstream 1.0kb downstream 8766   true HanXRQChr11: 17592274-17601039 Helianthus annuus
HanXRQChr11g0324441 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr11: 17592274-17593273 Helianthus annuus
HanXRQChr11g0324441 2.0kb upstream 2.0kb upstream 9766   true HanXRQChr11: 17593274-17603039 Helianthus annuus
HanXRQChr11g0324441 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr11: 17601040-17603039 Helianthus annuus
HanXRQChr11g0324441 2.0kb downstream 2.0kb downstream 9766   true HanXRQChr11: 17591274-17601039 Helianthus annuus
HanXRQChr11g0324441 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr11: 17591274-17593273 Helianthus annuus
HanXRQChr11g0324441 5.0kb upstream 5.0kb upstream 12766   true HanXRQChr11: 17593274-17606039 Helianthus annuus
HanXRQChr11g0324441 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr11: 17601040-17606039 Helianthus annuus
HanXRQChr11g0324441 5.0kb downstream 5.0kb downstream 12766   true HanXRQChr11: 17588274-17601039 Helianthus annuus
HanXRQChr11g0324441 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr11: 17588274-17593273 Helianthus annuus
HanXRQChr11g0324441 10.0kb upstream 10.0kb upstream 17766   true HanXRQChr11: 17593274-17611039 Helianthus annuus
HanXRQChr11g0324441 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr11: 17601040-17611039 Helianthus annuus
HanXRQChr11g0324441 10.0kb downstream 10.0kb downstream 17766   true HanXRQChr11: 17583274-17601039 Helianthus annuus
HanXRQChr11g0324441 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr11: 17583274-17593273 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467814 5263 Asterids View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain