Gene : HanXRQChr11g0326671 H. annuus r1.2
Defline:  (1 of 3) K02705 - photosystem II CP43 chlorophyll apoprotein (psbC) Genomic Order:  623
Name:  ? HanXRQChr11g0326671 Secondary Identifier:  ? PAC:40343545
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PHOTOALL-PWY Helianthus annuus pathologic  
Hannuus PWY-101 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr11g0326671 0.5kb upstream 0.5kb upstream 2931   true HanXRQChr11: 25893434-25896364 Helianthus annuus
HanXRQChr11g0326671 0.5kb upstream 0.5kb upstream 500   false HanXRQChr11: 25893434-25893933 Helianthus annuus
HanXRQChr11g0326671 0.5kb downstream 0.5kb downstream 2931   true HanXRQChr11: 25893934-25896864 Helianthus annuus
HanXRQChr11g0326671 0.5kb downstream 0.5kb downstream 500   false HanXRQChr11: 25896365-25896864 Helianthus annuus
HanXRQChr11g0326671 1.0kb upstream 1.0kb upstream 3431   true HanXRQChr11: 25892934-25896364 Helianthus annuus
HanXRQChr11g0326671 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr11: 25892934-25893933 Helianthus annuus
HanXRQChr11g0326671 1.0kb downstream 1.0kb downstream 3431   true HanXRQChr11: 25893934-25897364 Helianthus annuus
HanXRQChr11g0326671 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr11: 25896365-25897364 Helianthus annuus
HanXRQChr11g0326671 2.0kb upstream 2.0kb upstream 4431   true HanXRQChr11: 25891934-25896364 Helianthus annuus
HanXRQChr11g0326671 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr11: 25891934-25893933 Helianthus annuus
HanXRQChr11g0326671 2.0kb downstream 2.0kb downstream 4431   true HanXRQChr11: 25893934-25898364 Helianthus annuus
HanXRQChr11g0326671 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr11: 25896365-25898364 Helianthus annuus
HanXRQChr11g0326671 5.0kb upstream 5.0kb upstream 7431   true HanXRQChr11: 25888934-25896364 Helianthus annuus
HanXRQChr11g0326671 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr11: 25888934-25893933 Helianthus annuus
HanXRQChr11g0326671 5.0kb downstream 5.0kb downstream 7431   true HanXRQChr11: 25893934-25901364 Helianthus annuus
HanXRQChr11g0326671 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr11: 25896365-25901364 Helianthus annuus
HanXRQChr11g0326671 10.0kb upstream 10.0kb upstream 12431   true HanXRQChr11: 25883934-25896364 Helianthus annuus
HanXRQChr11g0326671 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr11: 25883934-25893933 Helianthus annuus
HanXRQChr11g0326671 10.0kb downstream 10.0kb downstream 12431   true HanXRQChr11: 25893934-25906364 Helianthus annuus
HanXRQChr11g0326671 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr11: 25896365-25906364 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121438639 5263 Asterids Singleton cluster - no MSA
123751197 5271 Pentapetalae View MSA
122773946 5272 Eudicot View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain