Gene : HanXRQChr11g0337711 H. annuus r1.2
Defline:  (1 of 1) PTHR11777//PTHR11777:SF18 - ALANYL-TRNA SYNTHETASE // ALANINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  1595
Name:  ? HanXRQChr11g0337711 Secondary Identifier:  ? PAC:40341899
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus TRNA-CHARGING-PWY Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr11g0337711 0.5kb upstream 0.5kb upstream 8035   true HanXRQChr11: 89008370-89016404 Helianthus annuus
HanXRQChr11g0337711 0.5kb upstream 0.5kb upstream 500   false HanXRQChr11: 89015905-89016404 Helianthus annuus
HanXRQChr11g0337711 0.5kb downstream 0.5kb downstream 8035   true HanXRQChr11: 89007870-89015904 Helianthus annuus
HanXRQChr11g0337711 0.5kb downstream 0.5kb downstream 500   false HanXRQChr11: 89007870-89008369 Helianthus annuus
HanXRQChr11g0337711 1.0kb upstream 1.0kb upstream 8535   true HanXRQChr11: 89008370-89016904 Helianthus annuus
HanXRQChr11g0337711 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr11: 89015905-89016904 Helianthus annuus
HanXRQChr11g0337711 1.0kb downstream 1.0kb downstream 8535   true HanXRQChr11: 89007370-89015904 Helianthus annuus
HanXRQChr11g0337711 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr11: 89007370-89008369 Helianthus annuus
HanXRQChr11g0337711 2.0kb upstream 2.0kb upstream 9535   true HanXRQChr11: 89008370-89017904 Helianthus annuus
HanXRQChr11g0337711 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr11: 89015905-89017904 Helianthus annuus
HanXRQChr11g0337711 2.0kb downstream 2.0kb downstream 9535   true HanXRQChr11: 89006370-89015904 Helianthus annuus
HanXRQChr11g0337711 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr11: 89006370-89008369 Helianthus annuus
HanXRQChr11g0337711 5.0kb upstream 5.0kb upstream 12535   true HanXRQChr11: 89008370-89020904 Helianthus annuus
HanXRQChr11g0337711 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr11: 89015905-89020904 Helianthus annuus
HanXRQChr11g0337711 5.0kb downstream 5.0kb downstream 12535   true HanXRQChr11: 89003370-89015904 Helianthus annuus
HanXRQChr11g0337711 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr11: 89003370-89008369 Helianthus annuus
HanXRQChr11g0337711 10.0kb upstream 10.0kb upstream 17535   true HanXRQChr11: 89008370-89025904 Helianthus annuus
HanXRQChr11g0337711 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr11: 89015905-89025904 Helianthus annuus
HanXRQChr11g0337711 10.0kb downstream 10.0kb downstream 17535   true HanXRQChr11: 88998370-89015904 Helianthus annuus
HanXRQChr11g0337711 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr11: 88998370-89008369 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473791 5263 Asterids View MSA
123740226 5271 Pentapetalae View MSA
122791486 5272 Eudicot View MSA
122047019 5273 Angiosperm View MSA
121346985 5274 Embryophyte View MSA
123424131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain