Gene : HanXRQChr12g0371451 H. annuus r1.2
Defline:  (1 of 3) K00797 - spermidine synthase (speE, SRM) Genomic Order:  1579
Name:  ? HanXRQChr12g0371451 Secondary Identifier:  ? PAC:40317889
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus BSUBPOLYAMSYN-PWY Helianthus annuus pathologic  
Hannuus PWY-7528 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr12g0371451 0.5kb upstream 0.5kb upstream 3756   true HanXRQChr12: 68926445-68930200 Helianthus annuus
HanXRQChr12g0371451 0.5kb upstream 0.5kb upstream 500   false HanXRQChr12: 68929701-68930200 Helianthus annuus
HanXRQChr12g0371451 0.5kb downstream 0.5kb downstream 3756   true HanXRQChr12: 68925945-68929700 Helianthus annuus
HanXRQChr12g0371451 0.5kb downstream 0.5kb downstream 500   false HanXRQChr12: 68925945-68926444 Helianthus annuus
HanXRQChr12g0371451 1.0kb upstream 1.0kb upstream 4256   true HanXRQChr12: 68926445-68930700 Helianthus annuus
HanXRQChr12g0371451 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr12: 68929701-68930700 Helianthus annuus
HanXRQChr12g0371451 1.0kb downstream 1.0kb downstream 4256   true HanXRQChr12: 68925445-68929700 Helianthus annuus
HanXRQChr12g0371451 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr12: 68925445-68926444 Helianthus annuus
HanXRQChr12g0371451 2.0kb upstream 2.0kb upstream 5256   true HanXRQChr12: 68926445-68931700 Helianthus annuus
HanXRQChr12g0371451 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr12: 68929701-68931700 Helianthus annuus
HanXRQChr12g0371451 2.0kb downstream 2.0kb downstream 5256   true HanXRQChr12: 68924445-68929700 Helianthus annuus
HanXRQChr12g0371451 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr12: 68924445-68926444 Helianthus annuus
HanXRQChr12g0371451 5.0kb upstream 5.0kb upstream 8256   true HanXRQChr12: 68926445-68934700 Helianthus annuus
HanXRQChr12g0371451 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr12: 68929701-68934700 Helianthus annuus
HanXRQChr12g0371451 5.0kb downstream 5.0kb downstream 8256   true HanXRQChr12: 68921445-68929700 Helianthus annuus
HanXRQChr12g0371451 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr12: 68921445-68926444 Helianthus annuus
HanXRQChr12g0371451 10.0kb upstream 10.0kb upstream 13256   true HanXRQChr12: 68926445-68939700 Helianthus annuus
HanXRQChr12g0371451 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr12: 68929701-68939700 Helianthus annuus
HanXRQChr12g0371451 10.0kb downstream 10.0kb downstream 13256   true HanXRQChr12: 68916445-68929700 Helianthus annuus
HanXRQChr12g0371451 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr12: 68916445-68926444 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121464395 5263 Asterids View MSA
123741827 5271 Pentapetalae View MSA
122790008 5272 Eudicot View MSA
122043696 5273 Angiosperm View MSA
121346443 5274 Embryophyte View MSA
123424303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain