Gene : HanXRQChr12g0375361 H. annuus r1.2
Defline:  (1 of 6) K00660 - chalcone synthase (CHS) Genomic Order:  1926
Name:  ? HanXRQChr12g0375361 Secondary Identifier:  ? PAC:40319759
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PWY1F-FLAVSYN Helianthus annuus pathologic  
Hannuus PWY-6787 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr12g0375361 0.5kb upstream 0.5kb upstream 2021   true HanXRQChr12: 89616013-89618033 Helianthus annuus
HanXRQChr12g0375361 0.5kb upstream 0.5kb upstream 500   false HanXRQChr12: 89616013-89616512 Helianthus annuus
HanXRQChr12g0375361 0.5kb downstream 0.5kb downstream 2021   true HanXRQChr12: 89616513-89618533 Helianthus annuus
HanXRQChr12g0375361 0.5kb downstream 0.5kb downstream 500   false HanXRQChr12: 89618034-89618533 Helianthus annuus
HanXRQChr12g0375361 1.0kb upstream 1.0kb upstream 2521   true HanXRQChr12: 89615513-89618033 Helianthus annuus
HanXRQChr12g0375361 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr12: 89615513-89616512 Helianthus annuus
HanXRQChr12g0375361 1.0kb downstream 1.0kb downstream 2521   true HanXRQChr12: 89616513-89619033 Helianthus annuus
HanXRQChr12g0375361 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr12: 89618034-89619033 Helianthus annuus
HanXRQChr12g0375361 2.0kb upstream 2.0kb upstream 3521   true HanXRQChr12: 89614513-89618033 Helianthus annuus
HanXRQChr12g0375361 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr12: 89614513-89616512 Helianthus annuus
HanXRQChr12g0375361 2.0kb downstream 2.0kb downstream 3521   true HanXRQChr12: 89616513-89620033 Helianthus annuus
HanXRQChr12g0375361 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr12: 89618034-89620033 Helianthus annuus
HanXRQChr12g0375361 5.0kb upstream 5.0kb upstream 6521   true HanXRQChr12: 89611513-89618033 Helianthus annuus
HanXRQChr12g0375361 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr12: 89611513-89616512 Helianthus annuus
HanXRQChr12g0375361 5.0kb downstream 5.0kb downstream 6521   true HanXRQChr12: 89616513-89623033 Helianthus annuus
HanXRQChr12g0375361 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr12: 89618034-89623033 Helianthus annuus
HanXRQChr12g0375361 10.0kb upstream 10.0kb upstream 11521   true HanXRQChr12: 89606513-89618033 Helianthus annuus
HanXRQChr12g0375361 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr12: 89606513-89616512 Helianthus annuus
HanXRQChr12g0375361 10.0kb downstream 10.0kb downstream 11521   true HanXRQChr12: 89616513-89628033 Helianthus annuus
HanXRQChr12g0375361 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr12: 89618034-89628033 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121427087 5263 Asterids Singleton cluster - no MSA
123757733 5271 Pentapetalae View MSA
122778752 5272 Eudicot View MSA
122051180 5273 Angiosperm View MSA
121350627 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain