Gene : HanXRQChr17g0549561 H. annuus r1.2
Defline:  (1 of 11) K00134 - glyceraldehyde 3-phosphate dehydrogenase (GAPDH, gapA) Genomic Order:  1527
Name:  ? HanXRQChr17g0549561 Secondary Identifier:  ? PAC:40327901
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus ANAEROFRUCAT-PWY Helianthus annuus pathologic  
Hannuus ANAGLYCOLYSIS-PWY Helianthus annuus pathologic  
Hannuus GLUCONEO-PWY Helianthus annuus pathologic  
Hannuus PWY-1042 Helianthus annuus pathologic  
Hannuus PWY-5464 Helianthus annuus pathologic  
Hannuus PWY66-399 Helianthus annuus pathologic  
Hannuus SUCSYN-PWY Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr17g0549561 0.5kb upstream 0.5kb upstream 3118   true HanXRQChr17: 62075476-62078593 Helianthus annuus
HanXRQChr17g0549561 0.5kb upstream 0.5kb upstream 500   false HanXRQChr17: 62075476-62075975 Helianthus annuus
HanXRQChr17g0549561 0.5kb downstream 0.5kb downstream 3118   true HanXRQChr17: 62075976-62079093 Helianthus annuus
HanXRQChr17g0549561 0.5kb downstream 0.5kb downstream 500   false HanXRQChr17: 62078594-62079093 Helianthus annuus
HanXRQChr17g0549561 1.0kb upstream 1.0kb upstream 3618   true HanXRQChr17: 62074976-62078593 Helianthus annuus
HanXRQChr17g0549561 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr17: 62074976-62075975 Helianthus annuus
HanXRQChr17g0549561 1.0kb downstream 1.0kb downstream 3618   true HanXRQChr17: 62075976-62079593 Helianthus annuus
HanXRQChr17g0549561 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr17: 62078594-62079593 Helianthus annuus
HanXRQChr17g0549561 2.0kb upstream 2.0kb upstream 4618   true HanXRQChr17: 62073976-62078593 Helianthus annuus
HanXRQChr17g0549561 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr17: 62073976-62075975 Helianthus annuus
HanXRQChr17g0549561 2.0kb downstream 2.0kb downstream 4618   true HanXRQChr17: 62075976-62080593 Helianthus annuus
HanXRQChr17g0549561 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr17: 62078594-62080593 Helianthus annuus
HanXRQChr17g0549561 5.0kb upstream 5.0kb upstream 7618   true HanXRQChr17: 62070976-62078593 Helianthus annuus
HanXRQChr17g0549561 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr17: 62070976-62075975 Helianthus annuus
HanXRQChr17g0549561 5.0kb downstream 5.0kb downstream 7618   true HanXRQChr17: 62075976-62083593 Helianthus annuus
HanXRQChr17g0549561 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr17: 62078594-62083593 Helianthus annuus
HanXRQChr17g0549561 10.0kb upstream 10.0kb upstream 12618   true HanXRQChr17: 62065976-62078593 Helianthus annuus
HanXRQChr17g0549561 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr17: 62065976-62075975 Helianthus annuus
HanXRQChr17g0549561 10.0kb downstream 10.0kb downstream 12618   true HanXRQChr17: 62075976-62088593 Helianthus annuus
HanXRQChr17g0549561 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr17: 62078594-62088593 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779529 5273 Angiosperm View MSA
121430947 5263 Asterids Singleton cluster - no MSA
123743189 5271 Pentapetalae View MSA
122770554 5272 Eudicot View MSA
121051183 5274 Embryophyte View MSA
123091284 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain