Gene : HanXRQChr17g0538471 H. annuus r1.2
Defline:  (1 of 3) PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED Genomic Order:  503
Name:  ? HanXRQChr17g0538471 Secondary Identifier:  ? PAC:40329412
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PWY-1081 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr17g0538471 0.5kb upstream 0.5kb upstream 6766   true HanXRQChr17: 17293931-17300696 Helianthus annuus
HanXRQChr17g0538471 0.5kb upstream 0.5kb upstream 500   false HanXRQChr17: 17293931-17294430 Helianthus annuus
HanXRQChr17g0538471 0.5kb downstream 0.5kb downstream 6766   true HanXRQChr17: 17294431-17301196 Helianthus annuus
HanXRQChr17g0538471 0.5kb downstream 0.5kb downstream 500   false HanXRQChr17: 17300697-17301196 Helianthus annuus
HanXRQChr17g0538471 1.0kb upstream 1.0kb upstream 7266   true HanXRQChr17: 17293431-17300696 Helianthus annuus
HanXRQChr17g0538471 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr17: 17293431-17294430 Helianthus annuus
HanXRQChr17g0538471 1.0kb downstream 1.0kb downstream 7266   true HanXRQChr17: 17294431-17301696 Helianthus annuus
HanXRQChr17g0538471 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr17: 17300697-17301696 Helianthus annuus
HanXRQChr17g0538471 2.0kb upstream 2.0kb upstream 8266   true HanXRQChr17: 17292431-17300696 Helianthus annuus
HanXRQChr17g0538471 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr17: 17292431-17294430 Helianthus annuus
HanXRQChr17g0538471 2.0kb downstream 2.0kb downstream 8266   true HanXRQChr17: 17294431-17302696 Helianthus annuus
HanXRQChr17g0538471 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr17: 17300697-17302696 Helianthus annuus
HanXRQChr17g0538471 5.0kb upstream 5.0kb upstream 11266   true HanXRQChr17: 17289431-17300696 Helianthus annuus
HanXRQChr17g0538471 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr17: 17289431-17294430 Helianthus annuus
HanXRQChr17g0538471 5.0kb downstream 5.0kb downstream 11266   true HanXRQChr17: 17294431-17305696 Helianthus annuus
HanXRQChr17g0538471 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr17: 17300697-17305696 Helianthus annuus
HanXRQChr17g0538471 10.0kb upstream 10.0kb upstream 16266   true HanXRQChr17: 17284431-17300696 Helianthus annuus
HanXRQChr17g0538471 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr17: 17284431-17294430 Helianthus annuus
HanXRQChr17g0538471 10.0kb downstream 10.0kb downstream 16266   true HanXRQChr17: 17294431-17310696 Helianthus annuus
HanXRQChr17g0538471 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr17: 17300697-17310696 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477959 5263 Asterids View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain