Gene : Pahal.5G505300 P. hallii v3.1
Defline:  (1 of 1) PTHR11851//PTHR11851:SF138 - METALLOPROTEASE // SUBFAMILY NOT NAMED Genomic Order:  4428
Name:  ? Pahal.5G505300 Secondary Identifier:  ? PAC:40362708
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii PWY-3781 Panicum hallii pathologic  
Phallii PWY-7279 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.5G505300 0.5kb upstream 0.5kb upstream 6093 true Chr05: 57018971-57025063 Panicum hallii
Pahal.5G505300 0.5kb upstream 0.5kb upstream 500 false Chr05: 57018971-57019470 Panicum hallii
Pahal.5G505300 0.5kb downstream 0.5kb downstream 6093 true Chr05: 57019471-57025563 Panicum hallii
Pahal.5G505300 0.5kb downstream 0.5kb downstream 500 false Chr05: 57025064-57025563 Panicum hallii
Pahal.5G505300 1.0kb upstream 1.0kb upstream 6593 true Chr05: 57018471-57025063 Panicum hallii
Pahal.5G505300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 57018471-57019470 Panicum hallii
Pahal.5G505300 1.0kb downstream 1.0kb downstream 6593 true Chr05: 57019471-57026063 Panicum hallii
Pahal.5G505300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 57025064-57026063 Panicum hallii
Pahal.5G505300 2.0kb upstream 2.0kb upstream 7593 true Chr05: 57017471-57025063 Panicum hallii
Pahal.5G505300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 57017471-57019470 Panicum hallii
Pahal.5G505300 2.0kb downstream 2.0kb downstream 7593 true Chr05: 57019471-57027063 Panicum hallii
Pahal.5G505300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 57025064-57027063 Panicum hallii
Pahal.5G505300 5.0kb upstream 5.0kb upstream 10593 true Chr05: 57014471-57025063 Panicum hallii
Pahal.5G505300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 57014471-57019470 Panicum hallii
Pahal.5G505300 5.0kb downstream 5.0kb downstream 10593 true Chr05: 57019471-57030063 Panicum hallii
Pahal.5G505300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 57025064-57030063 Panicum hallii
Pahal.5G505300 10.0kb upstream 10.0kb upstream 15593 true Chr05: 57009471-57025063 Panicum hallii
Pahal.5G505300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 57009471-57019470 Panicum hallii
Pahal.5G505300 10.0kb downstream 10.0kb downstream 15593 true Chr05: 57019471-57035063 Panicum hallii
Pahal.5G505300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 57025064-57035063 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
122189080 5267 Panicoideae View MSA
124574686 5269 Grass View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain