Gene : Pahal.9G043900 P. hallii v3.1
Defline:  (1 of 6) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase Genomic Order:  430
Name:  ? Pahal.9G043900 Secondary Identifier:  ? PAC:40358471
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii PWY-5098 Panicum hallii pathologic  
Phallii PWY-6927 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.9G043900 0.5kb upstream 0.5kb upstream 1868   true Chr09: 2419712-2421579 Panicum hallii
Pahal.9G043900 0.5kb upstream 0.5kb upstream 500   false Chr09: 2421080-2421579 Panicum hallii
Pahal.9G043900 0.5kb downstream 0.5kb downstream 1868   true Chr09: 2419212-2421079 Panicum hallii
Pahal.9G043900 0.5kb downstream 0.5kb downstream 500   false Chr09: 2419212-2419711 Panicum hallii
Pahal.9G043900 1.0kb upstream 1.0kb upstream 2368   true Chr09: 2419712-2422079 Panicum hallii
Pahal.9G043900 1.0kb upstream 1.0kb upstream 1000   false Chr09: 2421080-2422079 Panicum hallii
Pahal.9G043900 1.0kb downstream 1.0kb downstream 2368   true Chr09: 2418712-2421079 Panicum hallii
Pahal.9G043900 1.0kb downstream 1.0kb downstream 1000   false Chr09: 2418712-2419711 Panicum hallii
Pahal.9G043900 2.0kb upstream 2.0kb upstream 3368   true Chr09: 2419712-2423079 Panicum hallii
Pahal.9G043900 2.0kb upstream 2.0kb upstream 2000   false Chr09: 2421080-2423079 Panicum hallii
Pahal.9G043900 2.0kb downstream 2.0kb downstream 3368   true Chr09: 2417712-2421079 Panicum hallii
Pahal.9G043900 2.0kb downstream 2.0kb downstream 2000   false Chr09: 2417712-2419711 Panicum hallii
Pahal.9G043900 5.0kb upstream 5.0kb upstream 6368   true Chr09: 2419712-2426079 Panicum hallii
Pahal.9G043900 5.0kb upstream 5.0kb upstream 5000   false Chr09: 2421080-2426079 Panicum hallii
Pahal.9G043900 5.0kb downstream 5.0kb downstream 6368   true Chr09: 2414712-2421079 Panicum hallii
Pahal.9G043900 5.0kb downstream 5.0kb downstream 5000   false Chr09: 2414712-2419711 Panicum hallii
Pahal.9G043900 10.0kb upstream 10.0kb upstream 11368   true Chr09: 2419712-2431079 Panicum hallii
Pahal.9G043900 10.0kb upstream 10.0kb upstream 10000   false Chr09: 2421080-2431079 Panicum hallii
Pahal.9G043900 10.0kb downstream 10.0kb downstream 11368   true Chr09: 2409712-2421079 Panicum hallii
Pahal.9G043900 10.0kb downstream 10.0kb downstream 10000   false Chr09: 2409712-2419711 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027752 5273 Angiosperm View MSA
122197326 5267 Panicoideae View MSA
124575278 5269 Grass View MSA
123429167 5275 Viridiplantae View MSA
121348668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain