Gene : Pahal.9G307300 P. hallii v3.1
Defline:  (1 of 1) K02703 - photosystem II P680 reaction center D1 protein (psbA) Genomic Order:  2747
Name:  ? Pahal.9G307300 Secondary Identifier:  ? PAC:40354306
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii PHOTOALL-PWY Panicum hallii pathologic  
Phallii PWY-101 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.9G307300 0.5kb upstream 0.5kb upstream 1776   true Chr09: 34742856-34744631 Panicum hallii
Pahal.9G307300 0.5kb upstream 0.5kb upstream 500   false Chr09: 34742856-34743355 Panicum hallii
Pahal.9G307300 0.5kb downstream 0.5kb downstream 1776   true Chr09: 34743356-34745131 Panicum hallii
Pahal.9G307300 0.5kb downstream 0.5kb downstream 500   false Chr09: 34744632-34745131 Panicum hallii
Pahal.9G307300 1.0kb upstream 1.0kb upstream 2276   true Chr09: 34742356-34744631 Panicum hallii
Pahal.9G307300 1.0kb upstream 1.0kb upstream 1000   false Chr09: 34742356-34743355 Panicum hallii
Pahal.9G307300 1.0kb downstream 1.0kb downstream 2276   true Chr09: 34743356-34745631 Panicum hallii
Pahal.9G307300 1.0kb downstream 1.0kb downstream 1000   false Chr09: 34744632-34745631 Panicum hallii
Pahal.9G307300 2.0kb upstream 2.0kb upstream 3276   true Chr09: 34741356-34744631 Panicum hallii
Pahal.9G307300 2.0kb upstream 2.0kb upstream 2000   false Chr09: 34741356-34743355 Panicum hallii
Pahal.9G307300 2.0kb downstream 2.0kb downstream 3276   true Chr09: 34743356-34746631 Panicum hallii
Pahal.9G307300 2.0kb downstream 2.0kb downstream 2000   false Chr09: 34744632-34746631 Panicum hallii
Pahal.9G307300 5.0kb upstream 5.0kb upstream 6276   true Chr09: 34738356-34744631 Panicum hallii
Pahal.9G307300 5.0kb upstream 5.0kb upstream 5000   false Chr09: 34738356-34743355 Panicum hallii
Pahal.9G307300 5.0kb downstream 5.0kb downstream 6276   true Chr09: 34743356-34749631 Panicum hallii
Pahal.9G307300 5.0kb downstream 5.0kb downstream 5000   false Chr09: 34744632-34749631 Panicum hallii
Pahal.9G307300 10.0kb upstream 10.0kb upstream 11276   true Chr09: 34733356-34744631 Panicum hallii
Pahal.9G307300 10.0kb upstream 10.0kb upstream 10000   false Chr09: 34733356-34743355 Panicum hallii
Pahal.9G307300 10.0kb downstream 10.0kb downstream 11276   true Chr09: 34743356-34754631 Panicum hallii
Pahal.9G307300 10.0kb downstream 10.0kb downstream 10000   false Chr09: 34744632-34754631 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193421 5267 Panicoideae View MSA
124586576 5269 Grass View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain