Gene : Pahal.9G244400 P. hallii v3.1

Defline:  (1 of 1) PTHR23418//PTHR23418:SF4 - ACIREDUCTONE DIOXYGENASE // 1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4 Genomic Order:  2372
Name:  ? Pahal.9G244400 Secondary Identifier:  ? PAC:40359532

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii PWY-4361 Panicum hallii pathologic  
Phallii PWY-7270 Panicum hallii pathologic  
Phallii PWY-7528 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.9G244400 0.5kb upstream 0.5kb upstream 3264   true Chr09: 16616173-16619436 Panicum hallii
Pahal.9G244400 0.5kb upstream 0.5kb upstream 500   false Chr09: 16618937-16619436 Panicum hallii
Pahal.9G244400 0.5kb downstream 0.5kb downstream 3264   true Chr09: 16615673-16618936 Panicum hallii
Pahal.9G244400 0.5kb downstream 0.5kb downstream 500   false Chr09: 16615673-16616172 Panicum hallii
Pahal.9G244400 1.0kb upstream 1.0kb upstream 3764   true Chr09: 16616173-16619936 Panicum hallii
Pahal.9G244400 1.0kb upstream 1.0kb upstream 1000   false Chr09: 16618937-16619936 Panicum hallii
Pahal.9G244400 1.0kb downstream 1.0kb downstream 3764   true Chr09: 16615173-16618936 Panicum hallii
Pahal.9G244400 1.0kb downstream 1.0kb downstream 1000   false Chr09: 16615173-16616172 Panicum hallii
Pahal.9G244400 2.0kb upstream 2.0kb upstream 4764   true Chr09: 16616173-16620936 Panicum hallii
Pahal.9G244400 2.0kb upstream 2.0kb upstream 2000   false Chr09: 16618937-16620936 Panicum hallii
Pahal.9G244400 2.0kb downstream 2.0kb downstream 4764   true Chr09: 16614173-16618936 Panicum hallii
Pahal.9G244400 2.0kb downstream 2.0kb downstream 2000   false Chr09: 16614173-16616172 Panicum hallii
Pahal.9G244400 5.0kb upstream 5.0kb upstream 7764   true Chr09: 16616173-16623936 Panicum hallii
Pahal.9G244400 5.0kb upstream 5.0kb upstream 5000   false Chr09: 16618937-16623936 Panicum hallii
Pahal.9G244400 5.0kb downstream 5.0kb downstream 7764   true Chr09: 16611173-16618936 Panicum hallii
Pahal.9G244400 5.0kb downstream 5.0kb downstream 5000   false Chr09: 16611173-16616172 Panicum hallii
Pahal.9G244400 10.0kb upstream 10.0kb upstream 12764   true Chr09: 16616173-16628936 Panicum hallii
Pahal.9G244400 10.0kb upstream 10.0kb upstream 10000   false Chr09: 16618937-16628936 Panicum hallii
Pahal.9G244400 10.0kb downstream 10.0kb downstream 12764   true Chr09: 16606173-16618936 Panicum hallii
Pahal.9G244400 10.0kb downstream 10.0kb downstream 10000   false Chr09: 16606173-16616172 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180959 5267 Panicoideae View MSA
124572378 5269 Grass View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain