Gene : Pahal.4G005900 P. hallii v3.1
Defline:  (1 of 1) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  55
Name:  ? Pahal.4G005900 Secondary Identifier:  ? PAC:40370208
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii PWY-6689 Panicum hallii pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.4G005900 0.5kb upstream 0.5kb upstream 1825 true Chr04: 333237-335061 Panicum hallii
Pahal.4G005900 0.5kb upstream 0.5kb upstream 500 false Chr04: 333237-333736 Panicum hallii
Pahal.4G005900 0.5kb downstream 0.5kb downstream 1825 true Chr04: 333737-335561 Panicum hallii
Pahal.4G005900 0.5kb downstream 0.5kb downstream 500 false Chr04: 335062-335561 Panicum hallii
Pahal.4G005900 1.0kb upstream 1.0kb upstream 2325 true Chr04: 332737-335061 Panicum hallii
Pahal.4G005900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 332737-333736 Panicum hallii
Pahal.4G005900 1.0kb downstream 1.0kb downstream 2325 true Chr04: 333737-336061 Panicum hallii
Pahal.4G005900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 335062-336061 Panicum hallii
Pahal.4G005900 2.0kb upstream 2.0kb upstream 3325 true Chr04: 331737-335061 Panicum hallii
Pahal.4G005900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 331737-333736 Panicum hallii
Pahal.4G005900 2.0kb downstream 2.0kb downstream 3325 true Chr04: 333737-337061 Panicum hallii
Pahal.4G005900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 335062-337061 Panicum hallii
Pahal.4G005900 5.0kb upstream 5.0kb upstream 6325 true Chr04: 328737-335061 Panicum hallii
Pahal.4G005900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 328737-333736 Panicum hallii
Pahal.4G005900 5.0kb downstream 5.0kb downstream 6325 true Chr04: 333737-340061 Panicum hallii
Pahal.4G005900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 335062-340061 Panicum hallii
Pahal.4G005900 10.0kb upstream 10.0kb upstream 11325 true Chr04: 323737-335061 Panicum hallii
Pahal.4G005900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 323737-333736 Panicum hallii
Pahal.4G005900 10.0kb downstream 10.0kb downstream 11325 true Chr04: 333737-345061 Panicum hallii
Pahal.4G005900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 335062-345061 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041240 5273 Angiosperm View MSA
122175925 5267 Panicoideae View MSA
124584479 5269 Grass View MSA
123429143 5275 Viridiplantae View MSA
121344093 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain