Gene : Pahal.1G020700 P. hallii v3.1
Defline:  (1 of 1) K01703 - 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit (leuC) Genomic Order:  200
Name:  ? Pahal.1G020700 Secondary Identifier:  ? PAC:40382048
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii BRANCHED-CHAIN-AA-SYN-PWY Panicum hallii pathologic  
Phallii LEUSYN-PWY Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.1G020700 0.5kb upstream 0.5kb upstream 5262 true Chr01: 1508766-1514027 Panicum hallii
Pahal.1G020700 0.5kb upstream 0.5kb upstream 500 false Chr01: 1513528-1514027 Panicum hallii
Pahal.1G020700 0.5kb downstream 0.5kb downstream 5262 true Chr01: 1508266-1513527 Panicum hallii
Pahal.1G020700 0.5kb downstream 0.5kb downstream 500 false Chr01: 1508266-1508765 Panicum hallii
Pahal.1G020700 1.0kb upstream 1.0kb upstream 5762 true Chr01: 1508766-1514527 Panicum hallii
Pahal.1G020700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1513528-1514527 Panicum hallii
Pahal.1G020700 1.0kb downstream 1.0kb downstream 5762 true Chr01: 1507766-1513527 Panicum hallii
Pahal.1G020700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1507766-1508765 Panicum hallii
Pahal.1G020700 2.0kb upstream 2.0kb upstream 6762 true Chr01: 1508766-1515527 Panicum hallii
Pahal.1G020700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1513528-1515527 Panicum hallii
Pahal.1G020700 2.0kb downstream 2.0kb downstream 6762 true Chr01: 1506766-1513527 Panicum hallii
Pahal.1G020700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1506766-1508765 Panicum hallii
Pahal.1G020700 5.0kb upstream 5.0kb upstream 9762 true Chr01: 1508766-1518527 Panicum hallii
Pahal.1G020700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1513528-1518527 Panicum hallii
Pahal.1G020700 5.0kb downstream 5.0kb downstream 9762 true Chr01: 1503766-1513527 Panicum hallii
Pahal.1G020700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1503766-1508765 Panicum hallii
Pahal.1G020700 10.0kb upstream 10.0kb upstream 14762 true Chr01: 1508766-1523527 Panicum hallii
Pahal.1G020700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1513528-1523527 Panicum hallii
Pahal.1G020700 10.0kb downstream 10.0kb downstream 14762 true Chr01: 1498766-1513527 Panicum hallii
Pahal.1G020700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1498766-1508765 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186218 5267 Panicoideae View MSA
124568502 5269 Grass View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain