Gene : Pahal.1G057100 P. hallii v3.1
Defline:  (1 of 1) PTHR23163//PTHR23163:SF0 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1 Genomic Order:  555
Name:  ? Pahal.1G057100 Secondary Identifier:  ? PAC:40380524
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii PWY-7511 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.1G057100 0.5kb upstream 0.5kb upstream 11563 true Chr01: 3857473-3869035 Panicum hallii
Pahal.1G057100 0.5kb upstream 0.5kb upstream 500 false Chr01: 3868536-3869035 Panicum hallii
Pahal.1G057100 0.5kb downstream 0.5kb downstream 11563 true Chr01: 3856973-3868535 Panicum hallii
Pahal.1G057100 0.5kb downstream 0.5kb downstream 500 false Chr01: 3856973-3857472 Panicum hallii
Pahal.1G057100 1.0kb upstream 1.0kb upstream 12063 true Chr01: 3857473-3869535 Panicum hallii
Pahal.1G057100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3868536-3869535 Panicum hallii
Pahal.1G057100 1.0kb downstream 1.0kb downstream 12063 true Chr01: 3856473-3868535 Panicum hallii
Pahal.1G057100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3856473-3857472 Panicum hallii
Pahal.1G057100 2.0kb upstream 2.0kb upstream 13063 true Chr01: 3857473-3870535 Panicum hallii
Pahal.1G057100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3868536-3870535 Panicum hallii
Pahal.1G057100 2.0kb downstream 2.0kb downstream 13063 true Chr01: 3855473-3868535 Panicum hallii
Pahal.1G057100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3855473-3857472 Panicum hallii
Pahal.1G057100 5.0kb upstream 5.0kb upstream 16063 true Chr01: 3857473-3873535 Panicum hallii
Pahal.1G057100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3868536-3873535 Panicum hallii
Pahal.1G057100 5.0kb downstream 5.0kb downstream 16063 true Chr01: 3852473-3868535 Panicum hallii
Pahal.1G057100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3852473-3857472 Panicum hallii
Pahal.1G057100 10.0kb upstream 10.0kb upstream 21063 true Chr01: 3857473-3878535 Panicum hallii
Pahal.1G057100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3868536-3878535 Panicum hallii
Pahal.1G057100 10.0kb downstream 10.0kb downstream 21063 true Chr01: 3847473-3868535 Panicum hallii
Pahal.1G057100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3847473-3857472 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178596 5267 Panicoideae View MSA
124578331 5269 Grass View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain