Protein Family : E3 ubiquitin ligase involved in syntaxin degradation 122178596

Method ID:  5267 Method Name:  Panicoideae
Sequence Alignment:  View MSA Member Count:  11

11 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Seita.9G367100 (1 of 2) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 S. italica v2.2 10546   scaffold_9: 42722134-42732679
Zm00008a001728 (1 of 1) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 Z. mays PH207 v1.1 19880   chr01: 70941964-70961843
Pavir.1KG078600 (1 of 2) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 P. virgatum v4.1 10869   Chr01K: 7786143-7797011
Pavir.1NG072100 (1 of 2) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 P. virgatum v4.1 12331   Chr01N: 7210640-7222970
Sobic.001G340000 (1 of 1) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 S. bicolor v3.1.1 15700   Chr01: 62754370-62770069
Zm00001d029490 (1 of 322) 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 Z. mays RefGen_V4 19959   1: 72889642-72909600
Pahal.1G057100 (1 of 1) PTHR23163//PTHR23163:SF0 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1 P. hallii v3.1 11063   Chr01: 3857473-3868535
PhHAL.1G056300 (1 of 1) PTHR23163//PTHR23163:SF0 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1 P. hallii HAL v2.1 10807   Chr01: 3365930-3376736
Misin01G325200 (1 of 2) PTHR23163//PTHR23163:SF0 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1 M. sinensis v7.1 13363   Chr01: 108197040-108210402
Misin02G311200 (1 of 1) KOG0978//KOG4172 - E3 ubiquitin ligase involved in syntaxin degradation // Predicted E3 ubiquitin ligase M. sinensis v7.1 11898   Chr02: 100986367-100998264
Sevir.9G372800 (1 of 3) K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) S. viridis v2.1 10615   Chr_09: 41056651-41067265

11 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Seita.9G367100.1.p S. italica v2.2 122178596 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Zm00008a001728_P01 Z. mays PH207 v1.1 122178596 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Pavir.1NG072100.1.p P. virgatum v4.1 122178596 E3 ubiquitin ligase involved in syntaxin degradation 2 5267 Panicoideae
Pavir.1KG078600.1.p P. virgatum v4.1 122178596 E3 ubiquitin ligase involved in syntaxin degradation 2 5267 Panicoideae
Sobic.001G340000.3.p S. bicolor v3.1.1 122178596 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Zm00001d029490_P004 Z. mays RefGen_V4 122178596 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Pahal.1G057100.1.p P. hallii v3.1 122178596 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
PhHAL.1G056300.1.p P. hallii HAL v2.1 122178596 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae
Misin01G325200.1.p M. sinensis v7.1 122178596 E3 ubiquitin ligase involved in syntaxin degradation 2 5267 Panicoideae
Misin02G311200.1.p M. sinensis v7.1 122178596 E3 ubiquitin ligase involved in syntaxin degradation 2 5267 Panicoideae
Sevir.9G372800.1.p S. viridis v2.1 122178596 E3 ubiquitin ligase involved in syntaxin degradation 1 5267 Panicoideae