Gene : Pavir.1KG078600 P. virgatum v4.1
Defline:  (1 of 2) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 Genomic Order:  725
Name:  ? Pavir.1KG078600 Secondary Identifier:  ? PAC:37661771
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-7511 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG078600 0.5kb upstream 0.5kb upstream 11369 true Chr01K: 7786143-7797511 Panicum virgatum
Pavir.1KG078600 0.5kb upstream 0.5kb upstream 500 false Chr01K: 7797012-7797511 Panicum virgatum
Pavir.1KG078600 0.5kb downstream 0.5kb downstream 11369 true Chr01K: 7785643-7797011 Panicum virgatum
Pavir.1KG078600 0.5kb downstream 0.5kb downstream 500 false Chr01K: 7785643-7786142 Panicum virgatum
Pavir.1KG078600 1.0kb upstream 1.0kb upstream 11869 true Chr01K: 7786143-7798011 Panicum virgatum
Pavir.1KG078600 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 7797012-7798011 Panicum virgatum
Pavir.1KG078600 1.0kb downstream 1.0kb downstream 11869 true Chr01K: 7785143-7797011 Panicum virgatum
Pavir.1KG078600 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 7785143-7786142 Panicum virgatum
Pavir.1KG078600 2.0kb upstream 2.0kb upstream 12869 true Chr01K: 7786143-7799011 Panicum virgatum
Pavir.1KG078600 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 7797012-7799011 Panicum virgatum
Pavir.1KG078600 2.0kb downstream 2.0kb downstream 12869 true Chr01K: 7784143-7797011 Panicum virgatum
Pavir.1KG078600 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 7784143-7786142 Panicum virgatum
Pavir.1KG078600 5.0kb upstream 5.0kb upstream 15869 true Chr01K: 7786143-7802011 Panicum virgatum
Pavir.1KG078600 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 7797012-7802011 Panicum virgatum
Pavir.1KG078600 5.0kb downstream 5.0kb downstream 15869 true Chr01K: 7781143-7797011 Panicum virgatum
Pavir.1KG078600 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 7781143-7786142 Panicum virgatum
Pavir.1KG078600 10.0kb upstream 10.0kb upstream 20869 true Chr01K: 7786143-7807011 Panicum virgatum
Pavir.1KG078600 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 7797012-7807011 Panicum virgatum
Pavir.1KG078600 10.0kb downstream 10.0kb downstream 20869 true Chr01K: 7776143-7797011 Panicum virgatum
Pavir.1KG078600 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 7776143-7786142 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178596 5267 Panicoideae View MSA
124578331 5269 Grass View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain