Gene : Pavir.1NG072100 P. virgatum v4.1
Defline:  (1 of 2) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 Genomic Order:  674
Name:  ? Pavir.1NG072100 Secondary Identifier:  ? PAC:37612813
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-7511 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG072100 0.5kb upstream 0.5kb upstream 12831 true Chr01N: 7210640-7223470 Panicum virgatum
Pavir.1NG072100 0.5kb upstream 0.5kb upstream 500 false Chr01N: 7222971-7223470 Panicum virgatum
Pavir.1NG072100 0.5kb downstream 0.5kb downstream 12831 true Chr01N: 7210140-7222970 Panicum virgatum
Pavir.1NG072100 0.5kb downstream 0.5kb downstream 500 false Chr01N: 7210140-7210639 Panicum virgatum
Pavir.1NG072100 1.0kb upstream 1.0kb upstream 13331 true Chr01N: 7210640-7223970 Panicum virgatum
Pavir.1NG072100 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 7222971-7223970 Panicum virgatum
Pavir.1NG072100 1.0kb downstream 1.0kb downstream 13331 true Chr01N: 7209640-7222970 Panicum virgatum
Pavir.1NG072100 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 7209640-7210639 Panicum virgatum
Pavir.1NG072100 2.0kb upstream 2.0kb upstream 14331 true Chr01N: 7210640-7224970 Panicum virgatum
Pavir.1NG072100 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 7222971-7224970 Panicum virgatum
Pavir.1NG072100 2.0kb downstream 2.0kb downstream 14331 true Chr01N: 7208640-7222970 Panicum virgatum
Pavir.1NG072100 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 7208640-7210639 Panicum virgatum
Pavir.1NG072100 5.0kb upstream 5.0kb upstream 17331 true Chr01N: 7210640-7227970 Panicum virgatum
Pavir.1NG072100 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 7222971-7227970 Panicum virgatum
Pavir.1NG072100 5.0kb downstream 5.0kb downstream 17331 true Chr01N: 7205640-7222970 Panicum virgatum
Pavir.1NG072100 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 7205640-7210639 Panicum virgatum
Pavir.1NG072100 10.0kb upstream 10.0kb upstream 22331 true Chr01N: 7210640-7232970 Panicum virgatum
Pavir.1NG072100 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 7222971-7232970 Panicum virgatum
Pavir.1NG072100 10.0kb downstream 10.0kb downstream 22331 true Chr01N: 7200640-7222970 Panicum virgatum
Pavir.1NG072100 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 7200640-7210639 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178596 5267 Panicoideae View MSA
124578331 5269 Grass View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain