Gene : Pahal.1G080400 P. hallii v3.1

Defline:  (1 of 1) K02295 - cryptochrome (CRY) Genomic Order:  780
Name:  ? Pahal.1G080400 Secondary Identifier:  ? PAC:40380761

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.1G080400 0.5kb upstream 0.5kb upstream 4404 true Chr01: 5532997-5537400 Panicum hallii
Pahal.1G080400 0.5kb upstream 0.5kb upstream 500 false Chr01: 5532997-5533496 Panicum hallii
Pahal.1G080400 0.5kb downstream 0.5kb downstream 4404 true Chr01: 5533497-5537900 Panicum hallii
Pahal.1G080400 0.5kb downstream 0.5kb downstream 500 false Chr01: 5537401-5537900 Panicum hallii
Pahal.1G080400 1.0kb upstream 1.0kb upstream 4904 true Chr01: 5532497-5537400 Panicum hallii
Pahal.1G080400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 5532497-5533496 Panicum hallii
Pahal.1G080400 1.0kb downstream 1.0kb downstream 4904 true Chr01: 5533497-5538400 Panicum hallii
Pahal.1G080400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 5537401-5538400 Panicum hallii
Pahal.1G080400 2.0kb upstream 2.0kb upstream 5904 true Chr01: 5531497-5537400 Panicum hallii
Pahal.1G080400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 5531497-5533496 Panicum hallii
Pahal.1G080400 2.0kb downstream 2.0kb downstream 5904 true Chr01: 5533497-5539400 Panicum hallii
Pahal.1G080400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 5537401-5539400 Panicum hallii
Pahal.1G080400 5.0kb upstream 5.0kb upstream 8904 true Chr01: 5528497-5537400 Panicum hallii
Pahal.1G080400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 5528497-5533496 Panicum hallii
Pahal.1G080400 5.0kb downstream 5.0kb downstream 8904 true Chr01: 5533497-5542400 Panicum hallii
Pahal.1G080400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 5537401-5542400 Panicum hallii
Pahal.1G080400 10.0kb upstream 10.0kb upstream 13904 true Chr01: 5523497-5537400 Panicum hallii
Pahal.1G080400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 5523497-5533496 Panicum hallii
Pahal.1G080400 10.0kb downstream 10.0kb downstream 13904 true Chr01: 5533497-5547400 Panicum hallii
Pahal.1G080400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 5537401-5547400 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197332 5267 Panicoideae View MSA
124575728 5269 Grass View MSA
122046460 5273 Angiosperm View MSA
121346822 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain