Gene : Pahal.2G268600 P. hallii v3.1
Defline:  (1 of 9) 2.3.1.133 - Shikimate O-hydroxycinnamoyltransferase Genomic Order:  2116
Name:  ? Pahal.2G268600 Secondary Identifier:  ? PAC:40387686
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii PWY-361 Panicum hallii pathologic  
Phallii PWY-6040 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.2G268600 0.5kb upstream 0.5kb upstream 2614 true Chr02: 43230733-43233346 Panicum hallii
Pahal.2G268600 0.5kb upstream 0.5kb upstream 500 false Chr02: 43232847-43233346 Panicum hallii
Pahal.2G268600 0.5kb downstream 0.5kb downstream 2614 true Chr02: 43230233-43232846 Panicum hallii
Pahal.2G268600 0.5kb downstream 0.5kb downstream 500 false Chr02: 43230233-43230732 Panicum hallii
Pahal.2G268600 1.0kb upstream 1.0kb upstream 3114 true Chr02: 43230733-43233846 Panicum hallii
Pahal.2G268600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43232847-43233846 Panicum hallii
Pahal.2G268600 1.0kb downstream 1.0kb downstream 3114 true Chr02: 43229733-43232846 Panicum hallii
Pahal.2G268600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43229733-43230732 Panicum hallii
Pahal.2G268600 2.0kb upstream 2.0kb upstream 4114 true Chr02: 43230733-43234846 Panicum hallii
Pahal.2G268600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43232847-43234846 Panicum hallii
Pahal.2G268600 2.0kb downstream 2.0kb downstream 4114 true Chr02: 43228733-43232846 Panicum hallii
Pahal.2G268600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43228733-43230732 Panicum hallii
Pahal.2G268600 5.0kb upstream 5.0kb upstream 7114 true Chr02: 43230733-43237846 Panicum hallii
Pahal.2G268600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43232847-43237846 Panicum hallii
Pahal.2G268600 5.0kb downstream 5.0kb downstream 7114 true Chr02: 43225733-43232846 Panicum hallii
Pahal.2G268600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43225733-43230732 Panicum hallii
Pahal.2G268600 10.0kb upstream 10.0kb upstream 12114 true Chr02: 43230733-43242846 Panicum hallii
Pahal.2G268600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43232847-43242846 Panicum hallii
Pahal.2G268600 10.0kb downstream 10.0kb downstream 12114 true Chr02: 43220733-43232846 Panicum hallii
Pahal.2G268600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43220733-43230732 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994011 5273 Angiosperm View MSA
122186629 5267 Panicoideae View MSA
124582486 5269 Grass View MSA
121264258 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain