Gene : Glyma.05G006200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22981//PTHR22981:SF77 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED Genomic Order:  62
Name:  ? Glyma.05G006200 Secondary Identifier:  ? PAC:30527301
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G006200 0.5kb upstream 0.5kb upstream 4832 true Chr05: 566190-571021 Glycine max
Glyma.05G006200 0.5kb upstream 0.5kb upstream 500 false Chr05: 566190-566689 Glycine max
Glyma.05G006200 0.5kb downstream 0.5kb downstream 4832 true Chr05: 566690-571521 Glycine max
Glyma.05G006200 0.5kb downstream 0.5kb downstream 500 false Chr05: 571022-571521 Glycine max
Glyma.05G006200 1.0kb upstream 1.0kb upstream 5332 true Chr05: 565690-571021 Glycine max
Glyma.05G006200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 565690-566689 Glycine max
Glyma.05G006200 1.0kb downstream 1.0kb downstream 5332 true Chr05: 566690-572021 Glycine max
Glyma.05G006200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 571022-572021 Glycine max
Glyma.05G006200 2.0kb upstream 2.0kb upstream 6332 true Chr05: 564690-571021 Glycine max
Glyma.05G006200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 564690-566689 Glycine max
Glyma.05G006200 2.0kb downstream 2.0kb downstream 6332 true Chr05: 566690-573021 Glycine max
Glyma.05G006200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 571022-573021 Glycine max
Glyma.05G006200 5.0kb upstream 5.0kb upstream 9332 true Chr05: 561690-571021 Glycine max
Glyma.05G006200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 561690-566689 Glycine max
Glyma.05G006200 5.0kb downstream 5.0kb downstream 9332 true Chr05: 566690-576021 Glycine max
Glyma.05G006200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 571022-576021 Glycine max
Glyma.05G006200 10.0kb upstream 10.0kb upstream 14332 true Chr05: 556690-571021 Glycine max
Glyma.05G006200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 556690-566689 Glycine max
Glyma.05G006200 10.0kb downstream 10.0kb downstream 14332 true Chr05: 566690-581021 Glycine max
Glyma.05G006200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 571022-581021 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303894 5265 Fabidae View MSA
124072008 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.128052 0.0 0.90412 Low Low
cufflinks 3.15943 0.0 11.477   High
cufflinks 1.63594 0.0 6.92673    
cufflinks 1.74013 0.0 6.20817    
cufflinks 0.781582 0.0 2.78631    
cufflinks 0.435461 0.0 1.85806    
cufflinks 4.06785 0.0 14.2452   High
cufflinks 0.332514 0.0 1.44232    
cufflinks 0.990703 0.0 4.26027    
cufflinks 0.533        
cufflinks 0.046     Low Low
cufflinks 3.358       High
cufflinks 0.781        
cufflinks 0.988        
cufflinks 0.102        
cufflinks 0.543        
cufflinks 0.052     Low Low
cufflinks 3.21       High
cufflinks 4.144       High
cufflinks 0.25        
cufflinks 0.059     Low Low
cufflinks 0.435        
cufflinks 1.023        
cufflinks 0.089       Low
cufflinks 0.43        
cufflinks 0.196        

0 Strain