Gene : Glyma.05G002200 G. max Wm82.a2.v1
Defline:  (1 of 113) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  22
Name:  ? Glyma.05G002200 Secondary Identifier:  ? PAC:30524743
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G002200 0.5kb upstream 0.5kb upstream 1316 true Chr05: 170048-171363 Glycine max
Glyma.05G002200 0.5kb upstream 0.5kb upstream 500 false Chr05: 170048-170547 Glycine max
Glyma.05G002200 0.5kb downstream 0.5kb downstream 1316 true Chr05: 170548-171863 Glycine max
Glyma.05G002200 0.5kb downstream 0.5kb downstream 500 false Chr05: 171364-171863 Glycine max
Glyma.05G002200 1.0kb upstream 1.0kb upstream 1816 true Chr05: 169548-171363 Glycine max
Glyma.05G002200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 169548-170547 Glycine max
Glyma.05G002200 1.0kb downstream 1.0kb downstream 1816 true Chr05: 170548-172363 Glycine max
Glyma.05G002200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 171364-172363 Glycine max
Glyma.05G002200 2.0kb upstream 2.0kb upstream 2816 true Chr05: 168548-171363 Glycine max
Glyma.05G002200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 168548-170547 Glycine max
Glyma.05G002200 2.0kb downstream 2.0kb downstream 2816 true Chr05: 170548-173363 Glycine max
Glyma.05G002200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 171364-173363 Glycine max
Glyma.05G002200 5.0kb upstream 5.0kb upstream 5816 true Chr05: 165548-171363 Glycine max
Glyma.05G002200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 165548-170547 Glycine max
Glyma.05G002200 5.0kb downstream 5.0kb downstream 5816 true Chr05: 170548-176363 Glycine max
Glyma.05G002200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 171364-176363 Glycine max
Glyma.05G002200 10.0kb upstream 10.0kb upstream 10816 true Chr05: 160548-171363 Glycine max
Glyma.05G002200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 160548-170547 Glycine max
Glyma.05G002200 10.0kb downstream 10.0kb downstream 10816 true Chr05: 170548-181363 Glycine max
Glyma.05G002200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 171364-181363 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314289 5265 Fabidae View MSA
124071320 5270 Rosid View MSA
123749514 5271 Pentapetalae View MSA
122786269 5272 Eudicot View MSA
122049999 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.608 0.0 180.558 High  
cufflinks 13.9608 0.0 41.1341    
cufflinks 25.1428 0.0 69.1401 High  
cufflinks 91.6756 0.0 247.498 High  
cufflinks 6.93892 0.0 22.614    
cufflinks 4.58369 0.0 15.6847   Low
cufflinks 505.937 0.0 1731.72 High High
cufflinks 20.5501 0.0 57.8411    
cufflinks 4.38426 0.0 15.0773   Low
cufflinks 55.153     High  
cufflinks 15.626     High  
cufflinks 32.492     High  
cufflinks 3.634        
cufflinks 0.393       Low
cufflinks 0.275       Low
cufflinks 87.916     High  
cufflinks 44.003     High  
cufflinks 22.227     High  
cufflinks 25.594     High  
cufflinks 56.493     High  
cufflinks 7.936     High  
cufflinks 127.683     High High
cufflinks 108.581     High High
cufflinks 21.402     High  
cufflinks 58.618     High  
cufflinks 11.71     High  

0 Strain