Gene : Glyma.05G004800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33142:SF9 - CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR2-RELATED Genomic Order:  48
Name:  ? Glyma.05G004800 Secondary Identifier:  ? PAC:30527050
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G004800 0.5kb upstream 0.5kb upstream 833 true Chr05: 416564-417396 Glycine max
Glyma.05G004800 0.5kb upstream 0.5kb upstream 500 false Chr05: 416564-417063 Glycine max
Glyma.05G004800 0.5kb downstream 0.5kb downstream 833 true Chr05: 417064-417896 Glycine max
Glyma.05G004800 0.5kb downstream 0.5kb downstream 500 false Chr05: 417397-417896 Glycine max
Glyma.05G004800 1.0kb upstream 1.0kb upstream 1333 true Chr05: 416064-417396 Glycine max
Glyma.05G004800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 416064-417063 Glycine max
Glyma.05G004800 1.0kb downstream 1.0kb downstream 1333 true Chr05: 417064-418396 Glycine max
Glyma.05G004800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 417397-418396 Glycine max
Glyma.05G004800 2.0kb upstream 2.0kb upstream 2333 true Chr05: 415064-417396 Glycine max
Glyma.05G004800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 415064-417063 Glycine max
Glyma.05G004800 2.0kb downstream 2.0kb downstream 2333 true Chr05: 417064-419396 Glycine max
Glyma.05G004800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 417397-419396 Glycine max
Glyma.05G004800 5.0kb upstream 5.0kb upstream 5333 true Chr05: 412064-417396 Glycine max
Glyma.05G004800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 412064-417063 Glycine max
Glyma.05G004800 5.0kb downstream 5.0kb downstream 5333 true Chr05: 417064-422396 Glycine max
Glyma.05G004800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 417397-422396 Glycine max
Glyma.05G004800 10.0kb upstream 10.0kb upstream 10333 true Chr05: 407064-417396 Glycine max
Glyma.05G004800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 407064-417063 Glycine max
Glyma.05G004800 10.0kb downstream 10.0kb downstream 10333 true Chr05: 417064-427396 Glycine max
Glyma.05G004800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 417397-427396 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314299 5265 Fabidae View MSA
124069674 5270 Rosid View MSA
123743249 5271 Pentapetalae View MSA
122791350 5272 Eudicot View MSA
122045203 5273 Angiosperm View MSA
121310415 5274 Embryophyte View MSA
123347905 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.69819 0.0 6.54014   High
cufflinks 0.412596 0.0 1.68515    
cufflinks 0.162886 0.0 0.705552 Low Low
cufflinks 0.525786 0.0 2.10574    
cufflinks 0.741021 0.0 2.94298    
cufflinks 0.247962 0.0 1.03539   Low
cufflinks 2.14308 0.0 8.1531   High
cufflinks 0.8682 0.0 3.42508    
cufflinks 4.334       High
cufflinks 0.434        
cufflinks 2.985        
cufflinks 4.9       High
cufflinks 4.878       High
cufflinks 0.337       Low
cufflinks 1.436        
cufflinks 0.609        
cufflinks 4.45       High
cufflinks 5.799       High
cufflinks 0.808        
cufflinks 0.179       Low
cufflinks 0.9        
cufflinks 2.358        
cufflinks 0.231       Low
cufflinks 1.032        
cufflinks 0.346       Low

0 Strain