Gene : Glyma.04G253100 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED Genomic Order:  2531
Name:  ? Glyma.04G253100 Secondary Identifier:  ? PAC:30490936
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6351 Glycine max pathologic  
Gmax PWY-6352 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G253100 0.5kb upstream 0.5kb upstream 5053 true Chr04: 51988319-51993371 Glycine max
Glyma.04G253100 0.5kb upstream 0.5kb upstream 500 false Chr04: 51988319-51988818 Glycine max
Glyma.04G253100 0.5kb downstream 0.5kb downstream 5053 true Chr04: 51988819-51993871 Glycine max
Glyma.04G253100 0.5kb downstream 0.5kb downstream 500 false Chr04: 51993372-51993871 Glycine max
Glyma.04G253100 1.0kb upstream 1.0kb upstream 5553 true Chr04: 51987819-51993371 Glycine max
Glyma.04G253100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51987819-51988818 Glycine max
Glyma.04G253100 1.0kb downstream 1.0kb downstream 5553 true Chr04: 51988819-51994371 Glycine max
Glyma.04G253100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51993372-51994371 Glycine max
Glyma.04G253100 2.0kb upstream 2.0kb upstream 6553 true Chr04: 51986819-51993371 Glycine max
Glyma.04G253100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51986819-51988818 Glycine max
Glyma.04G253100 2.0kb downstream 2.0kb downstream 6553 true Chr04: 51988819-51995371 Glycine max
Glyma.04G253100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51993372-51995371 Glycine max
Glyma.04G253100 5.0kb upstream 5.0kb upstream 9553 true Chr04: 51983819-51993371 Glycine max
Glyma.04G253100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51983819-51988818 Glycine max
Glyma.04G253100 5.0kb downstream 5.0kb downstream 9553 true Chr04: 51988819-51998371 Glycine max
Glyma.04G253100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51993372-51998371 Glycine max
Glyma.04G253100 10.0kb upstream 10.0kb upstream 14553 true Chr04: 51978819-51993371 Glycine max
Glyma.04G253100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51978819-51988818 Glycine max
Glyma.04G253100 10.0kb downstream 10.0kb downstream 14553 true Chr04: 51988819-52003371 Glycine max
Glyma.04G253100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51993372-52003371 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311925 5265 Fabidae View MSA
124061441 5270 Rosid View MSA
123746948 5271 Pentapetalae View MSA
122794503 5272 Eudicot View MSA
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.06423 0.0 13.0932    
cufflinks 4.1421 0.0 13.4457    
cufflinks 2.39856 0.0 8.78779   Low
cufflinks 4.86441 0.0 15.2737    
cufflinks 3.23677 0.0 10.9887    
cufflinks 4.56417 0.0 14.3895    
cufflinks 2.22665 0.0 8.3758   Low
cufflinks 5.05334 0.0 15.7968   High
cufflinks 3.14896 0.0 10.7605    
cufflinks 2.998        
cufflinks 0.964       Low
cufflinks 3.257        
cufflinks 2.209        
cufflinks 2.592        
cufflinks 0.909       Low
cufflinks 2.404        
cufflinks 1.83        
cufflinks 3.949       High
cufflinks 3.778       High
cufflinks 2.283        
cufflinks 0.603       Low
cufflinks 2.513        
cufflinks 2.71        
cufflinks 1.369        
cufflinks 2.213        
cufflinks 0.602       Low

0 Strain