Gene : Glyma.04G254600 G. max Wm82.a2.v1
Defline:  (1 of 2) 6.3.2.5 - Phosphopantothenate--cysteine ligase / Phosphopantothenoylcysteine synthetase Genomic Order:  2546
Name:  ? Glyma.04G254600 Secondary Identifier:  ? PAC:30488964
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax COA-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G254600 0.5kb upstream 0.5kb upstream 5048 true Chr04: 52123090-52128137 Glycine max
Glyma.04G254600 0.5kb upstream 0.5kb upstream 500 false Chr04: 52123090-52123589 Glycine max
Glyma.04G254600 0.5kb downstream 0.5kb downstream 5048 true Chr04: 52123590-52128637 Glycine max
Glyma.04G254600 0.5kb downstream 0.5kb downstream 500 false Chr04: 52128138-52128637 Glycine max
Glyma.04G254600 1.0kb upstream 1.0kb upstream 5548 true Chr04: 52122590-52128137 Glycine max
Glyma.04G254600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 52122590-52123589 Glycine max
Glyma.04G254600 1.0kb downstream 1.0kb downstream 5548 true Chr04: 52123590-52129137 Glycine max
Glyma.04G254600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 52128138-52129137 Glycine max
Glyma.04G254600 2.0kb upstream 2.0kb upstream 6548 true Chr04: 52121590-52128137 Glycine max
Glyma.04G254600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 52121590-52123589 Glycine max
Glyma.04G254600 2.0kb downstream 2.0kb downstream 6548 true Chr04: 52123590-52130137 Glycine max
Glyma.04G254600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 52128138-52130137 Glycine max
Glyma.04G254600 5.0kb upstream 5.0kb upstream 9548 true Chr04: 52118590-52128137 Glycine max
Glyma.04G254600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 52118590-52123589 Glycine max
Glyma.04G254600 5.0kb downstream 5.0kb downstream 9548 true Chr04: 52123590-52133137 Glycine max
Glyma.04G254600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 52128138-52133137 Glycine max
Glyma.04G254600 10.0kb upstream 10.0kb upstream 14548 true Chr04: 52113590-52128137 Glycine max
Glyma.04G254600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 52113590-52123589 Glycine max
Glyma.04G254600 10.0kb downstream 10.0kb downstream 14548 true Chr04: 52123590-52138137 Glycine max
Glyma.04G254600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 52128138-52138137 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305468 5265 Fabidae View MSA
124065288 5270 Rosid View MSA
123750270 5271 Pentapetalae View MSA
122791769 5272 Eudicot View MSA
122051236 5273 Angiosperm View MSA
121346014 5274 Embryophyte View MSA
123425902 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9478 0.0 43.2237   High
cufflinks 5.44141 0.0 22.6502    
cufflinks 10.1041 0.0 36.7148    
cufflinks 7.77808 0.0 29.6025    
cufflinks 5.48205 0.0 22.9142    
cufflinks 6.8287 0.0 26.8289    
cufflinks 10.535 0.0 38.5568   High
cufflinks 6.57295 0.0 25.9268    
cufflinks 4.98531 0.0 21.4231   Low
cufflinks 0.889        
cufflinks 0.27       Low
cufflinks 1.205       High
cufflinks 0.753        
cufflinks 0.633        
cufflinks 0.408       Low
cufflinks 1.05        
cufflinks 0.516        
cufflinks 1.267       High
cufflinks 0.916        
cufflinks 1.081        
cufflinks 0.397       Low
cufflinks 1.116        
cufflinks 1.073        
cufflinks 0.454        
cufflinks 1.083        
cufflinks 0.433       Low

0 Strain