Gene : Glyma.05G020500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23344//PTHR23344:SF19 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE Genomic Order:  205
Name:  ? Glyma.05G020500 Secondary Identifier:  ? PAC:30527189
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7409 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G020500 0.5kb upstream 0.5kb upstream 4698 true Chr05: 1830461-1835158 Glycine max
Glyma.05G020500 0.5kb upstream 0.5kb upstream 500 false Chr05: 1830461-1830960 Glycine max
Glyma.05G020500 0.5kb downstream 0.5kb downstream 4698 true Chr05: 1830961-1835658 Glycine max
Glyma.05G020500 0.5kb downstream 0.5kb downstream 500 false Chr05: 1835159-1835658 Glycine max
Glyma.05G020500 1.0kb upstream 1.0kb upstream 5198 true Chr05: 1829961-1835158 Glycine max
Glyma.05G020500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1829961-1830960 Glycine max
Glyma.05G020500 1.0kb downstream 1.0kb downstream 5198 true Chr05: 1830961-1836158 Glycine max
Glyma.05G020500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1835159-1836158 Glycine max
Glyma.05G020500 2.0kb upstream 2.0kb upstream 6198 true Chr05: 1828961-1835158 Glycine max
Glyma.05G020500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1828961-1830960 Glycine max
Glyma.05G020500 2.0kb downstream 2.0kb downstream 6198 true Chr05: 1830961-1837158 Glycine max
Glyma.05G020500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1835159-1837158 Glycine max
Glyma.05G020500 5.0kb upstream 5.0kb upstream 9198 true Chr05: 1825961-1835158 Glycine max
Glyma.05G020500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1825961-1830960 Glycine max
Glyma.05G020500 5.0kb downstream 5.0kb downstream 9198 true Chr05: 1830961-1840158 Glycine max
Glyma.05G020500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1835159-1840158 Glycine max
Glyma.05G020500 10.0kb upstream 10.0kb upstream 14198 true Chr05: 1820961-1835158 Glycine max
Glyma.05G020500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1820961-1830960 Glycine max
Glyma.05G020500 10.0kb downstream 10.0kb downstream 14198 true Chr05: 1830961-1845158 Glycine max
Glyma.05G020500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1835159-1845158 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301995 5265 Fabidae View MSA
124061908 5270 Rosid View MSA
123737505 5271 Pentapetalae View MSA
122790009 5272 Eudicot View MSA
122046255 5273 Angiosperm View MSA
121345517 5274 Embryophyte View MSA
123425927 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.8726 0.0 48.1247    
cufflinks 15.568 0.0 42.1845    
cufflinks 10.9447 0.0 30.3272   Low
cufflinks 37.4327 0.0 100.457 High High
cufflinks 13.545 0.0 37.0798    
cufflinks 31.5696 0.0 84.3114 High High
cufflinks 23.5387 0.0 62.8797 High  
cufflinks 20.2318 0.0 54.1905    
cufflinks 16.3411 0.0 44.1657    
cufflinks 11.215     High High
cufflinks 1.297       Low
cufflinks 4.554        
cufflinks 7.769     High High
cufflinks 8.37     High High
cufflinks 0.821       Low
cufflinks 4.011        
cufflinks 3.52        
cufflinks 6.487        
cufflinks 4.481        
cufflinks 3.462        
cufflinks 2.459        
cufflinks 3.657        
cufflinks 6.169        
cufflinks 1.299       Low
cufflinks 3.787        
cufflinks 3.02        

0 Strain