Gene : Glyma.05G018100 G. max Wm82.a2.v1
Defline:  (1 of 15) PTHR31992:SF8 - DOF ZINC FINGER PROTEIN DOF1.1-RELATED Genomic Order:  181
Name:  ? Glyma.05G018100 Secondary Identifier:  ? PAC:30525089
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G018100 0.5kb upstream 0.5kb upstream 2194 true Chr05: 1605945-1608138 Glycine max
Glyma.05G018100 0.5kb upstream 0.5kb upstream 500 false Chr05: 1605945-1606444 Glycine max
Glyma.05G018100 0.5kb downstream 0.5kb downstream 2194 true Chr05: 1606445-1608638 Glycine max
Glyma.05G018100 0.5kb downstream 0.5kb downstream 500 false Chr05: 1608139-1608638 Glycine max
Glyma.05G018100 1.0kb upstream 1.0kb upstream 2694 true Chr05: 1605445-1608138 Glycine max
Glyma.05G018100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1605445-1606444 Glycine max
Glyma.05G018100 1.0kb downstream 1.0kb downstream 2694 true Chr05: 1606445-1609138 Glycine max
Glyma.05G018100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1608139-1609138 Glycine max
Glyma.05G018100 2.0kb upstream 2.0kb upstream 3694 true Chr05: 1604445-1608138 Glycine max
Glyma.05G018100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1604445-1606444 Glycine max
Glyma.05G018100 2.0kb downstream 2.0kb downstream 3694 true Chr05: 1606445-1610138 Glycine max
Glyma.05G018100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1608139-1610138 Glycine max
Glyma.05G018100 5.0kb upstream 5.0kb upstream 6694 true Chr05: 1601445-1608138 Glycine max
Glyma.05G018100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1601445-1606444 Glycine max
Glyma.05G018100 5.0kb downstream 5.0kb downstream 6694 true Chr05: 1606445-1613138 Glycine max
Glyma.05G018100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1608139-1613138 Glycine max
Glyma.05G018100 10.0kb upstream 10.0kb upstream 11694 true Chr05: 1596445-1608138 Glycine max
Glyma.05G018100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1596445-1606444 Glycine max
Glyma.05G018100 10.0kb downstream 10.0kb downstream 11694 true Chr05: 1606445-1618138 Glycine max
Glyma.05G018100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1608139-1618138 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310656 5265 Fabidae View MSA
124061595 5270 Rosid View MSA
123739205 5271 Pentapetalae View MSA
122790965 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.39601 0.0 18.2909    
cufflinks 3.06712 0.0 9.71399    
cufflinks 4.57647 0.0 13.7587    
cufflinks 7.17158 0.0 20.2545   High
cufflinks 1.20723 0.0 4.23937    
cufflinks 0.763495 0.0 2.77618    
cufflinks 0.292564 0.0 1.11438   Low
cufflinks 5.7169 0.0 16.5571    
cufflinks 0.76261 0.0 2.77164    
cufflinks 3.973        
cufflinks 0.104       Low
cufflinks 4.936        
cufflinks 0.097       Low
cufflinks 0.029     Low Low
cufflinks 0.067       Low
cufflinks 5.718        
cufflinks 0.338        
cufflinks 9.125     High High
cufflinks 2.32        
cufflinks 6.294       High
cufflinks 0.24        
cufflinks 5.649        
cufflinks 2.848        
cufflinks 0.177        
cufflinks 5.192        
cufflinks 0.078       Low

0 Strain