Gene : Glyma.05G018200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR35502:SF2 - MOVEMENT PROTEIN BINDING PROTEIN 2C Genomic Order:  182
Name:  ? Glyma.05G018200 Secondary Identifier:  ? PAC:30524597
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G018200 0.5kb upstream 0.5kb upstream 5048 true Chr05: 1614158-1619205 Glycine max
Glyma.05G018200 0.5kb upstream 0.5kb upstream 500 false Chr05: 1614158-1614657 Glycine max
Glyma.05G018200 0.5kb downstream 0.5kb downstream 5048 true Chr05: 1614658-1619705 Glycine max
Glyma.05G018200 0.5kb downstream 0.5kb downstream 500 false Chr05: 1619206-1619705 Glycine max
Glyma.05G018200 1.0kb upstream 1.0kb upstream 5548 true Chr05: 1613658-1619205 Glycine max
Glyma.05G018200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1613658-1614657 Glycine max
Glyma.05G018200 1.0kb downstream 1.0kb downstream 5548 true Chr05: 1614658-1620205 Glycine max
Glyma.05G018200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1619206-1620205 Glycine max
Glyma.05G018200 2.0kb upstream 2.0kb upstream 6548 true Chr05: 1612658-1619205 Glycine max
Glyma.05G018200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1612658-1614657 Glycine max
Glyma.05G018200 2.0kb downstream 2.0kb downstream 6548 true Chr05: 1614658-1621205 Glycine max
Glyma.05G018200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1619206-1621205 Glycine max
Glyma.05G018200 5.0kb upstream 5.0kb upstream 9548 true Chr05: 1609658-1619205 Glycine max
Glyma.05G018200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1609658-1614657 Glycine max
Glyma.05G018200 5.0kb downstream 5.0kb downstream 9548 true Chr05: 1614658-1624205 Glycine max
Glyma.05G018200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1619206-1624205 Glycine max
Glyma.05G018200 10.0kb upstream 10.0kb upstream 14548 true Chr05: 1604658-1619205 Glycine max
Glyma.05G018200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1604658-1614657 Glycine max
Glyma.05G018200 10.0kb downstream 10.0kb downstream 14548 true Chr05: 1614658-1629205 Glycine max
Glyma.05G018200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1619206-1629205 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040997 5273 Angiosperm View MSA
122299272 5265 Fabidae View MSA
124064916 5270 Rosid View MSA
123736835 5271 Pentapetalae View MSA
122796308 5272 Eudicot View MSA
121350543 5274 Embryophyte View MSA
123381783 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.6954 0.0 5.73955   Low
cufflinks 12.0877 0.0 32.581    
cufflinks 3.58619 0.0 10.9049   Low
cufflinks 14.5457 0.0 38.9373    
cufflinks 6.37027 0.0 18.0903    
cufflinks 6.46198 0.0 18.2977    
cufflinks 11.5272 0.0 31.2025    
cufflinks 19.4107 0.0 51.7872   High
cufflinks 12.2269 0.0 32.955    
cufflinks 5.674       High
cufflinks 0.699       Low
cufflinks 2.54        
cufflinks 2.795        
cufflinks 2.862        
cufflinks 2.146        
cufflinks 3.657        
cufflinks 1.326        
cufflinks 4.672        
cufflinks 4.78       High
cufflinks 3.696        
cufflinks 0.999       Low
cufflinks 3.869        
cufflinks 3.809        
cufflinks 0.838       Low
cufflinks 4.154        
cufflinks 1.177       Low

0 Strain