Gene : Glyma.05G014200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10302:SF3 - SINGLE-STRANDED DNA-BINDING PROTEIN Genomic Order:  142
Name:  ? Glyma.05G014200 Secondary Identifier:  ? PAC:30524773
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G014200 0.5kb upstream 0.5kb upstream 3259 true Chr05: 1334985-1338243 Glycine max
Glyma.05G014200 0.5kb upstream 0.5kb upstream 500 false Chr05: 1337744-1338243 Glycine max
Glyma.05G014200 0.5kb downstream 0.5kb downstream 3259 true Chr05: 1334485-1337743 Glycine max
Glyma.05G014200 0.5kb downstream 0.5kb downstream 500 false Chr05: 1334485-1334984 Glycine max
Glyma.05G014200 1.0kb upstream 1.0kb upstream 3759 true Chr05: 1334985-1338743 Glycine max
Glyma.05G014200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1337744-1338743 Glycine max
Glyma.05G014200 1.0kb downstream 1.0kb downstream 3759 true Chr05: 1333985-1337743 Glycine max
Glyma.05G014200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1333985-1334984 Glycine max
Glyma.05G014200 2.0kb upstream 2.0kb upstream 4759 true Chr05: 1334985-1339743 Glycine max
Glyma.05G014200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1337744-1339743 Glycine max
Glyma.05G014200 2.0kb downstream 2.0kb downstream 4759 true Chr05: 1332985-1337743 Glycine max
Glyma.05G014200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1332985-1334984 Glycine max
Glyma.05G014200 5.0kb upstream 5.0kb upstream 7759 true Chr05: 1334985-1342743 Glycine max
Glyma.05G014200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1337744-1342743 Glycine max
Glyma.05G014200 5.0kb downstream 5.0kb downstream 7759 true Chr05: 1329985-1337743 Glycine max
Glyma.05G014200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1329985-1334984 Glycine max
Glyma.05G014200 10.0kb upstream 10.0kb upstream 12759 true Chr05: 1334985-1347743 Glycine max
Glyma.05G014200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1337744-1347743 Glycine max
Glyma.05G014200 10.0kb downstream 10.0kb downstream 12759 true Chr05: 1324985-1337743 Glycine max
Glyma.05G014200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1324985-1334984 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304236 5265 Fabidae View MSA
124065076 5270 Rosid View MSA
123739023 5271 Pentapetalae View MSA
122787839 5272 Eudicot View MSA
122045301 5273 Angiosperm View MSA
121349645 5274 Embryophyte View MSA
123381385 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.7485 0.0 55.8659    
cufflinks 21.6732 0.0 58.2846 High  
cufflinks 9.43165 0.0 27.2213   Low
cufflinks 19.1872 0.0 51.8902    
cufflinks 28.3475 0.0 75.6438 High High
cufflinks 14.5843 0.0 40.0624    
cufflinks 23.2818 0.0 62.3925 High  
cufflinks 20.073 0.0 54.1361    
cufflinks 20.9074 0.0 56.2362 High  
cufflinks 5.982        
cufflinks 1.54       Low
cufflinks 4.483        
cufflinks 9.607     High High
cufflinks 12.378     High High
cufflinks 2.397       Low
cufflinks 5.176        
cufflinks 3.303        
cufflinks 5.473        
cufflinks 8.526     High High
cufflinks 3.606        
cufflinks 2.603        
cufflinks 4.187        
cufflinks 6.769        
cufflinks 1.709       Low
cufflinks 4.478        
cufflinks 3.101        

0 Strain