Gene : Glyma.05G015100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11064:SF35 - PROTEIN DR1 HOMOLOG Genomic Order:  151
Name:  ? Glyma.05G015100 Secondary Identifier:  ? PAC:30524413
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G015100 0.5kb upstream 0.5kb upstream 4935 true Chr05: 1379741-1384675 Glycine max
Glyma.05G015100 0.5kb upstream 0.5kb upstream 500 false Chr05: 1384176-1384675 Glycine max
Glyma.05G015100 0.5kb downstream 0.5kb downstream 4935 true Chr05: 1379241-1384175 Glycine max
Glyma.05G015100 0.5kb downstream 0.5kb downstream 500 false Chr05: 1379241-1379740 Glycine max
Glyma.05G015100 1.0kb upstream 1.0kb upstream 5435 true Chr05: 1379741-1385175 Glycine max
Glyma.05G015100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1384176-1385175 Glycine max
Glyma.05G015100 1.0kb downstream 1.0kb downstream 5435 true Chr05: 1378741-1384175 Glycine max
Glyma.05G015100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1378741-1379740 Glycine max
Glyma.05G015100 2.0kb upstream 2.0kb upstream 6435 true Chr05: 1379741-1386175 Glycine max
Glyma.05G015100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1384176-1386175 Glycine max
Glyma.05G015100 2.0kb downstream 2.0kb downstream 6435 true Chr05: 1377741-1384175 Glycine max
Glyma.05G015100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1377741-1379740 Glycine max
Glyma.05G015100 5.0kb upstream 5.0kb upstream 9435 true Chr05: 1379741-1389175 Glycine max
Glyma.05G015100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1384176-1389175 Glycine max
Glyma.05G015100 5.0kb downstream 5.0kb downstream 9435 true Chr05: 1374741-1384175 Glycine max
Glyma.05G015100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1374741-1379740 Glycine max
Glyma.05G015100 10.0kb upstream 10.0kb upstream 14435 true Chr05: 1379741-1394175 Glycine max
Glyma.05G015100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1384176-1394175 Glycine max
Glyma.05G015100 10.0kb downstream 10.0kb downstream 14435 true Chr05: 1369741-1384175 Glycine max
Glyma.05G015100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1369741-1379740 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305516 5265 Fabidae View MSA
124066760 5270 Rosid View MSA
123746342 5271 Pentapetalae View MSA
122796163 5272 Eudicot View MSA
122043494 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121351075 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.1491 0.0 59.7871    
cufflinks 22.5649 0.0 67.8742 High High
cufflinks 23.1812 0.0 74.405 High High
cufflinks 16.9538 0.0 52.5446    
cufflinks 14.1732 0.0 48.1404   Low
cufflinks 15.5769 0.0 52.1316    
cufflinks 19.9573 0.0 60.8794    
cufflinks 16.5095 0.0 53.8954    
cufflinks 15.5235 0.0 52.1137    
cufflinks 1.575       Low
cufflinks 3.027       High
cufflinks 2.158        
cufflinks 1.596       Low
cufflinks 1.685       Low
cufflinks 2.649        
cufflinks 2.754        
cufflinks 1.768       Low
cufflinks 2.185        
cufflinks 2.496        
cufflinks 2.864        
cufflinks 2.291        
cufflinks 2.712        
cufflinks 2.758        
cufflinks 2.748        
cufflinks 2.782        
cufflinks 2.677        

0 Strain