Gene : Glyma.05G009200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24351:SF70 - PROTEIN KINASE PINOID 2 Genomic Order:  92
Name:  ? Glyma.05G009200 Secondary Identifier:  ? PAC:30523848
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G009200 0.5kb upstream 0.5kb upstream 2779 true Chr05: 819157-821935 Glycine max
Glyma.05G009200 0.5kb upstream 0.5kb upstream 500 false Chr05: 821436-821935 Glycine max
Glyma.05G009200 0.5kb downstream 0.5kb downstream 2779 true Chr05: 818657-821435 Glycine max
Glyma.05G009200 0.5kb downstream 0.5kb downstream 500 false Chr05: 818657-819156 Glycine max
Glyma.05G009200 1.0kb upstream 1.0kb upstream 3279 true Chr05: 819157-822435 Glycine max
Glyma.05G009200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 821436-822435 Glycine max
Glyma.05G009200 1.0kb downstream 1.0kb downstream 3279 true Chr05: 818157-821435 Glycine max
Glyma.05G009200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 818157-819156 Glycine max
Glyma.05G009200 2.0kb upstream 2.0kb upstream 4279 true Chr05: 819157-823435 Glycine max
Glyma.05G009200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 821436-823435 Glycine max
Glyma.05G009200 2.0kb downstream 2.0kb downstream 4279 true Chr05: 817157-821435 Glycine max
Glyma.05G009200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 817157-819156 Glycine max
Glyma.05G009200 5.0kb upstream 5.0kb upstream 7279 true Chr05: 819157-826435 Glycine max
Glyma.05G009200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 821436-826435 Glycine max
Glyma.05G009200 5.0kb downstream 5.0kb downstream 7279 true Chr05: 814157-821435 Glycine max
Glyma.05G009200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 814157-819156 Glycine max
Glyma.05G009200 10.0kb upstream 10.0kb upstream 12279 true Chr05: 819157-831435 Glycine max
Glyma.05G009200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 821436-831435 Glycine max
Glyma.05G009200 10.0kb downstream 10.0kb downstream 12279 true Chr05: 809157-821435 Glycine max
Glyma.05G009200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 809157-819156 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304799 5265 Fabidae View MSA
124061530 5270 Rosid View MSA
123741128 5271 Pentapetalae View MSA
122794491 5272 Eudicot View MSA
122048881 5273 Angiosperm View MSA
121311151 5274 Embryophyte View MSA
123348487 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.741327 0.0 2.65106    
cufflinks 1.06232 0.0 3.70226    
cufflinks 0.124083 0.0 0.485284 Low Low
cufflinks 0.23295 0.0 0.886334    
cufflinks 5.83051 0.0 16.2828   High
cufflinks 0.489028 0.0 1.7942    
cufflinks 1.06297 0.0 3.68994    
cufflinks 0.277325 0.0 1.04734    
cufflinks 15.1345 0.0 40.3795   High
cufflinks 0.45        
cufflinks 0.416        
cufflinks 0.183       Low
cufflinks 0.8        
cufflinks 1.482        
cufflinks 5.382     High High
cufflinks 3.425       High
cufflinks 0.181       Low
cufflinks 0.218       Low
cufflinks 1.368        
cufflinks 3.461       High
cufflinks 0.774        
cufflinks 4.135       High
cufflinks 3.925       High
cufflinks 0.336        
cufflinks 2.922        
cufflinks 0.549        

0 Strain